Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00507 ATGTCTCCGCCGCTGCTCGGCATAGGTGAGGCAGAAGGTAAAACCAATGCTACTTTACTGGTTTCCTCAACTGCCACTGAAAATGCAAGACTCAATGCCACGGGGTTAAAAGAACATAACTATATGGGATTGTCTGATTCTTCTTCTGTGGACAGCTCAGTCCTGTCCTTCTCAGATGAGACTAAAAGTAACCTAAACCTAAAAGCCACAGAGCTGAGGCTTGGCCTTCCAGGATCTCAGTCTCCTGAACGAGACTCAGATCTCTGCTTGAGAAGCTCAACTCAATTGAATGAGAAACCCTTGTTTCCACTGCGCCCATTAACTGATGATCACCACTCTTCAACAAAGACTGCTGTTTTGGGCAGCAAGAGAGGGTTCTCAGATGCCATGAACGGGTTCTCAGAGGCGAAATTTCTTACTGATTCAGAGGCCAATAATGTACTGTCCCCCAGGCCTTCCCATAACATGGGATTAAAAACTAGCTCTATGCTTGAGAATCTTGGGGCTCAAGCCAAAGCCAAAGAAGTAACACCAGCAAAGGCAACACTTGAGAGGCCTCATTCTGTGAATGAAACTAAAGCTAACCTTGAAGGTTCTGCAAATAACAATAGCAATGCACCAGCTACCAAGGCCCAGGTTGTGGGTTGGCCTCCTATAAGATCTTTTAGGAAGAATTCGCTCGCTACTACTTCAAAGAATACTGAAGAAGTAGATGGAAAAGCAGGATCTAGTGCACTGTTCATCAAAGTCAGTATGGATGGCGCTCCATATTTAAGGAAAGTAGATTTGAAGAACTACTCTGCATATCCAGAACTGTCATCTGCTCTGGAGAAGATGTTCAGCTGTTTTACCATAGGTCAATATGGCTCTCATGGAACTCTAGGCAGGGAGATTTTAAATGAAAGCAAGCTGAAGGATCTGCTTCATGGGTCTGAATATGTTCTAACCTATGAGGACAAAGATGGGGACTGGATGCTCGTGGGTGATGTTCCTTGGGAGATGTTCATTGATACATGCAGGAGACTGAGGATCATGAAGAGTTCCGATGCCATTGGTCTTGCGCCAAGGGCTGTGGAAAAAAGCAAGAGTAGGAACTAG 1098 0.4508 MSPPLLGIGEAEGKTNATLLVSSTATENARLNATGLKEHNYMGLSDSSSVDSSVLSFSDETKSNLNLKATELRLGLPGSQSPERDSDLCLRSSTQLNEKPLFPLRPLTDDHHSSTKTAVLGSKRGFSDAMNGFSEAKFLTDSEANNVLSPRPSHNMGLKTSSMLENLGAQAKAKEVTPAKATLERPHSVNETKANLEGSANNNSNAPATKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKAGSSALFIKVSMDGAPYLRKVDLKNYSAYPELSSALEKMFSCFTIGQYGSHGTLGREILNESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00507 365 Gene3D - 240 359 - -
Accr3g00507 365 ProSiteProfiles PB1 domain profile. 245 347 IPR000270 GO:0005515
Accr3g00507 365 FunFam Auxin-responsive protein 240 357 - -
Accr3g00507 365 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 352 IPR003311 GO:0005634|GO:0006355
Accr3g00507 365 Pfam AUX/IAA family 70 356 IPR033389 -
Accr3g00507 365 SUPERFAMILY CAD & PB1 domains 243 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00507 Accr-Chr3 5817289 5819755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00507 259 350 B3 DNA Binding Superfamily AT1G19220 31.522 2.63e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr3g00507 AUX_IAA 1.4e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00507 K14484 - gmx:100815447 562.762