Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00492 ATGACTTGTTCCAGCATAAAATCAGTAACCGAACGATACAGCAAAACTAAAGAGGAACATCATCAACTAGGAAGTTCAACCTCTGAAGTGAAGTTTTGGCAAAGGGAGGTAGCAGTGTTGAGGCAACAATTGCATAACTTGCAAGAGAGTCACCGCAGGCAAATAATGGGAGAAGAACTTTCAGGTTTGACTGTCAAAGATTTACAGAGTTTAGAGGGCCAGTTGGAAATTAGCCTTCGAGGTGTCCGTTTTAAAAAGGATCAACTTTTAATGGATGAAATACAGGAAATAAACCAAAAGGGAAACCTCTTACACCAAGAAAATGAGGAACTGCGCAAGAAGGTAAACCTAATTCATCAAGAAAACAAGGAATTAAAAAAGAAGATCTATGGAACAAGAGATGGAAATGGAACAAACAGAAATTCTCTTCTCACAGATGGCCTAGGCATAGGAGAGAATTTACATGTGCCGATGAATCTCCAGCTTAGCCAGCCTCATCAGCAAAACCATGAGTCGCCTTCAGGAGCCAGAGAGTTGAGCAGATTGCAACTGCACTGA 558 0.4104 MTCSSIKSVTERYSKTKEEHHQLGSSTSEVKFWQREVAVLRQQLHNLQESHRRQIMGEELSGLTVKDLQSLEGQLEISLRGVRFKKDQLLMDEIQEINQKGNLLHQENEELRKKVNLIHQENKELKKKIYGTRDGNGTNRNSLLTDGLGIGENLHVPMNLQLSQPHQQNHESPSGARELSRLQLH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00492 185 Coils Coil 94 128 - -
Accr3g00492 185 MobiDBLite consensus disorder prediction 164 185 - -
Accr3g00492 185 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g00492 185 Coils Coil 30 50 - -
Accr3g00492 185 ProSiteProfiles K-box domain profile. 30 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr3g00492 185 Pfam K-box region 26 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00492 Accr-Chr3 5666929 5672129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00492 1 184 MADS-box Gene Family AT3G57230 53.261 3.28e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00492 K09264 - qsa:O6P43_015429 275.018