Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00482 ATGCCTCACAGAGCGACTTACTTTTTCCCGAGGCAGTTTCCGGAGCGTGGGTTGGATGAATCTTCGAAACAGCTATTAGATCACGAGAAGAATAAAATTGTCAACTCCATCATATCAGAAACCTTAGACGTTGAAAGCGACACTAAAAAGGCAATTACAACTGTTACTACTGCCACAAAGACAAAGGACGACGTCGTTTTCCCGTCTGAGAAGCACTCAGCTGTATCCGACCTTTTCACGGGCAATGACAAGTTCCGGACCAAACAGAAGCAAGTTTCTGCTTTCCGCGACTGGTTGAAAGAGAAAAAAGAGGATAGATCGGGTCACGTGAAACCACACTCCCGACGGTTCTCCTGTGAGGGAGACCACGAGCTTCTTCTTCCGCCGGAGTCCAAGCCTCCGCCGCTGGAGACAGTGAAAGATGCAATCGACCGGAGTTTTGACCGCCAAGTCTCGTTGCCGAGATTATCCAGCGGCAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACCACGTTGGACGGCAATTTTTCCAGCGACATTAAGGACGAAACGACGTCGTCTCGGGTGTCCCCCACTACAAGACGACTGGAGGAAGTGGGGGAAGAAGGTAAGGAGACGTTGGCGCAGAAGTACAAAGAGAGCTTCTGCCTGCAGATCGCACTTGCTAAGAGAATCACCTGCCTAGCAAGTCTCGTTGCCGATGAGCCTGTGCTTACTTTGGACGCTGGAATCGAGACGTGGGATGTGGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCATACTCCGACAAAATATCAGATGGTTTTTACAACATCTTGGGGATGAATCCATATCTGTGGGTAATGTGCAACGAGCTGGAGGAAGGTAGACGGCTTCCACCTTTGATGACGCTTAAAGCAATGGAGCCAAGCGAGACGTCTATGGAGGTGATTCTTGTAGATAGACACGAGGACTCTAGGCTAAAGGAGCTTCATGATAAAGCACAAGAATTGTATTGTGATTCAGAGAACACCTTGGTAGTGGTGGAAAAACTTGGAAAACTTGTTGCGGTCTATATGGGGGGTACCTTCCCGGTGGAGCAAGGAGATCTCCACAAGCAATGGAAGATGGTTAGTAAGAGATTGAGAAATTTCCAGAAGTGTGTTGTGCTTCCTATCGGCAGCCTATGTGCAGGACTTTGCAGGCATCGGGCAATCCTCTTCAAGAGATTGGCAGATTACATTGGTCTGCCATGTCGTATTGCTCGAGCTTGCAAATATTGTGCAGCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGACAGGCAACTCTCAAGGGAATATGTAGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCGTATGTCTGTTCAACGCCTTCTCCTTTTCAAATTTCTCATATACTGGAATCCAAGTCTCCTTATACGGATGAAGCATCGAGTTCTCGGTTTTCAAGTTCCACTGACAGTTCTGTTGTTCCTAAAAGTCATTTGTATTTCGGCTGTGCAAAGAAAGATCAACTGGTCAAAAGAAATGATTTGCTTAAATGTCCTGTGAACTCAAAATATGCTTCAGTTGATCAAACCCATGCAGTTAATGTAGAGGAACGTGAAGTTCTGTGTTCAAATTTGCCTTCCATTCAGGAAGGTGTTTCTGAAGACCTGCATTCAGCCAATAAGGTATTGTTGCATGAATATCCCATGCATGCTGAGGATTCAGTTGTCATAAACGAAACTTCCAATAATGAGATCATTGGAACCGGAAGTCCATTGGCAAAATCTACTTCTAAGAAACTTATATCAGGCCCATCTTGCCAGTCAGAAATAGAATCTGTAGATAGTAGACCTGAAAGCCATGATCTTTTTTCTGCCAAAAACATTCCAAGATATTTGAATCTTGAGCCATCACTTGCCATGGATTGGCTGGAAATATCATGGGATGAATTACGCATAAAAGAGCGTGTTGGTGCTGGGTCATTTGGGACAGTGCACCGGGCTGAATGGCATGGATCTGATGTTGCAGTTAAGGTTTTAACAATTCAGGATTTCCAGGATGAGCAGTTGAAAGAGTTCCTCAGAGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTGCTCTTCATGGGCGCAGTTACAAAACAGCCTAATCTATCAATTGTAACAGAATATTTACCGAGGGGTAGTTTATACCGCCTGATACATAGGCCAGCATCTGGTGAAATGTTGGATCAAAGGAGACGATTACGGATGGCTTTAGATGTGGCTAAAGGGATAAATTATCTACACTGTTTGAGCCCTCCAATTGTGCATTGGGATCTCAAATCTCCAAATTTGTTGGTTGACAAAAATTGGACTGTAAAAGTGTGTGATTTTGGGTTGTCAAGATTTAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCAAACGAGAAGTCTGATGTTTTCAGTTTTGGAGTCATCTTGTGGGAACTTGTGACCATGCAGCAACCATGGAATGGACTCAGTCCTGCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAATCGGAAGCTCTCTATCCCTCCAAACATCTCCCCGATATTGGCCTCCCTCATGGAATCTTGTTGGGATGATGATCCCAAGAAACGGCCTTCTTTCTCCAGTATTGTAGAATCGCTAAAGAAGCTGCTAAGATCTCCGGTGGAGATGATAAAAATGGGTGGGGCATAA 2799 0.4516 MPHRATYFFPRQFPERGLDESSKQLLDHEKNKIVNSIISETLDVESDTKKAITTVTTATKTKDDVVFPSEKHSAVSDLFTGNDKFRTKQKQVSAFRDWLKEKKEDRSGHVKPHSRRFSCEGDHELLLPPESKPPPLETVKDAIDRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSDIKDETTSSRVSPTTRRLEEVGEEGKETLAQKYKESFCLQIALAKRITCLASLVADEPVLTLDAGIETWDVESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNELEEGRRLPPLMTLKAMEPSETSMEVILVDRHEDSRLKELHDKAQELYCDSENTLVVVEKLGKLVAVYMGGTFPVEQGDLHKQWKMVSKRLRNFQKCVVLPIGSLCAGLCRHRAILFKRLADYIGLPCRIARACKYCAADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPFQISHILESKSPYTDEASSSRFSSSTDSSVVPKSHLYFGCAKKDQLVKRNDLLKCPVNSKYASVDQTHAVNVEEREVLCSNLPSIQEGVSEDLHSANKVLLHEYPMHAEDSVVINETSNNEIIGTGSPLAKSTSKKLISGPSCQSEIESVDSRPESHDLFSAKNIPRYLNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFQDEQLKEFLREVAIMKRVRHPNVVLFMGAVTKQPNLSIVTEYLPRGSLYRLIHRPASGEMLDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVFSFGVILWELVTMQQPWNGLSPAQVVGAVAFQNRKLSIPPNISPILASLMESCWDDDPKKRPSFSSIVESLKKLLRSPVEMIKMGGA 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00482 932 FunFam Serine/threonine-protein kinase CTR1 741 926 - -
Accr3g00482 932 SUPERFAMILY Protein kinase-like (PK-like) 637 915 IPR011009 -
Accr3g00482 932 Gene3D Phosphorylase Kinase; domain 1 655 739 - -
Accr3g00482 932 FunFam Serine/threonine-protein kinase isoform 1 652 740 - -
Accr3g00482 932 ProSiteProfiles Protein kinase domain profile. 662 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00482 932 Gene3D Transferase(Phosphotransferase) domain 1 741 927 - -
Accr3g00482 932 MobiDBLite consensus disorder prediction 103 136 - -
Accr3g00482 932 SMART serkin_6 662 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00482 932 ProSitePatterns Protein kinases ATP-binding region signature. 668 689 IPR017441 GO:0005524
Accr3g00482 932 PRINTS Tyrosine kinase catalytic domain signature 843 865 IPR001245 GO:0004672|GO:0006468
Accr3g00482 932 PRINTS Tyrosine kinase catalytic domain signature 736 749 IPR001245 GO:0004672|GO:0006468
Accr3g00482 932 PRINTS Tyrosine kinase catalytic domain signature 887 909 IPR001245 GO:0004672|GO:0006468
Accr3g00482 932 PRINTS Tyrosine kinase catalytic domain signature 777 795 IPR001245 GO:0004672|GO:0006468
Accr3g00482 932 CDD STKc_MAP3K-like 668 916 - -
Accr3g00482 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Accr3g00482 932 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 242 921 - -
Accr3g00482 932 MobiDBLite consensus disorder prediction 103 127 - -
Accr3g00482 932 Pfam Ethylene-responsive protein kinase Le-CTR1 249 457 - -
Accr3g00482 932 Pfam Protein tyrosine and serine/threonine kinase 662 916 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00482 Accr-Chr3 5323755 5329509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00482 1 931 MAP Kinase Kinase Kinase AT4G24480 57.570 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Accr3g00482 PK_Tyr_Ser-Thr 5.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00482 - - gmx:100808435 1301.58