Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00476 ATGAACGAAGAAGAGGAGAGTTTTATAGAAACGAACTCGGCGCGTCCAGGTCTTCTTTTTGACCCTGCAAAATATGGCGCACTGAATTTGCAAGACAAACAAAAGCTAGTTCAAGAGATTGCTCGACAATCAAAAGATGCCAGAAATATGCTCTACTCCTTTACGCGCAAGGAGCTTCTGGAAATAATCTGTGCTGAACTTGGCAAAGAGAGGAAGTACACTGGATATACTAAGACTCAGATGATAGAGTATCTCCTTAAGATAATTTCTAGGAAATCCAAGTGGCGCATAGTCCAAAATAACAGTCACATTGGTTCTAAAAGGAAAAGTGGACCTCTATCTCAGGATTTACATTATGTTCCTCTGGCGAATAATAAAGAGGGAAAAGTAAAATCATTATTGTGTCGGAATGTTGCGTGCAGAGCTACTTTGTGTCCTGAAGATGCTTTTTGTAAGAGATGTTCTTGCTGTATTTGTCATTTTTATGATGATAACAAGGATCCTAGTTTATGGCTGACCTGTGGATCTGATCTTGATGAGAAGGATTCATGTGGAATGTCTTGTCATTTACAATGTGCTTTGAATTATAAGAAGTCTGGCATTTTGAAGGGCATATTTAGTACAACGTTAGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACATGGAGAAAGCAATTATTGGTTGCAAAAGAAGCCAGAAGAGTTGATATACTTTGTTTTCGGATATCCTTGGCTCACAGAATTCTATTAGGGACTGAGGTATACAAGGAAGTACATGAGATTGTAGAGGCTGCTCTCAAACTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAATGCTTAAGGATGACACGAGGTATTGTGAACAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCGTTTTGATTCAATGTTTCCTAACCTTTACCCTTACTCTGTGGAAAATAAAAATGTACCAACATGCACTATCCGTTTTGAAGAGTGCCTTCCTACGTCTGTGGTCATTGTGCTAGGGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTCTGGCACAGAGCATCAACAATGGAATACTCTGAACAACCTACCTTCATTGTATTAAGGCCAGAAAAAAAGTTTAAGTTGGAAAATCTCTATCCTTCAACCGAGTATTTTTGCAAGGCTTCTCTTTTTAGCAGCACGGGCATTCTGGGTACTGCAGAAGCTAGATGGGTCACCCCTTGTAATCCCGGTGTATCTCCTTCAAAAGTATCTAGAACTGGCAGTTACAGGGATCATAATAGATATTCGCCTCATGGATCCTCTGTTACCACTTTGGACATACATGCTCAGGCAAAATATAGGATAGCTCTTGAAAATCATCATCGCATGGAATCTGCCAACTCTGACGTCAACTCATTCTCCAGGGACCGTCCTGCAAAACTTGCCTTCTCTGATAAGTTCAGGGGCAGAATTGAAGGGTTCCTCTCAAAGCCTCCATCAATTGAATCTGTTACATCTAAAAGTTTTGCTGCAGTTTCACCTTCCACACCTACAAAATTGGACGAAATGAGACAAGTTACAGGTTTGGGCGGCAGAAAGCGCTCGGAGGAAAATGATTACGAGTACTCAGTCAGGGTAGTCAAGTGGTTAGAGCATGAAGGTCACGTTGACCTAAACTTCAGAGTAAAGTTTCTGACTTGGTTCAGCCTTAAAGCCAATACACAAGAGAGAAGGGTGGTTCGTGCTTTTGTGGATGCACTGATCGATGACCCACCGAGCTTAGTTGATCAGCTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAACCTTAG 1872 0.4124 MNEEEESFIETNSARPGLLFDPAKYGALNLQDKQKLVQEIARQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISRKSKWRIVQNNSHIGSKRKSGPLSQDLHYVPLANNKEGKVKSLLCRNVACRATLCPEDAFCKRCSCCICHFYDDNKDPSLWLTCGSDLDEKDSCGMSCHLQCALNYKKSGILKGIFSTTLDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCFRISLAHRILLGTEVYKEVHEIVEAALKLLNNEVGPQDQECLRMTRGIVNRLSCGAEVQKLCSYAVERFDSMFPNLYPYSVENKNVPTCTIRFEECLPTSVVIVLGYEDHLLKDFLGCRLWHRASTMEYSEQPTFIVLRPEKKFKLENLYPSTEYFCKASLFSSTGILGTAEARWVTPCNPGVSPSKVSRTGSYRDHNRYSPHGSSVTTLDIHAQAKYRIALENHHRMESANSDVNSFSRDRPAKLAFSDKFRGRIEGFLSKPPSIESVTSKSFAAVSPSTPTKLDEMRQVTGLGGRKRSEENDYEYSVRVVKWLEHEGHVDLNFRVKFLTWFSLKANTQERRVVRAFVDALIDDPPSLVDQLIHTFMDEICCEQKP 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00476 623 PANTHER VIN3-LIKE PROTEIN 2-RELATED 19 463 IPR044514 GO:0010048|GO:0040029
Accr3g00476 623 Pfam PHD - plant homeodomain finger protein 135 254 IPR032881 -
Accr3g00476 623 CDD PHD_VIN3_plant 155 219 - -
Accr3g00476 623 MobiDBLite consensus disorder prediction 432 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00476 Accr-Chr3 5254938 5259527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00476 9 617 PHD Gene Family AT5G57380 33.863 2.49e-103 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00476 - - gmx:100785502 828.55