Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00471 ATGTTGGAAGATGATAAGAAGAACAAGAAGGTCGCTTTTAGCGAGGAGGATGCTGCTGCTCTCTTAGTGAAGTATGATGCAACCACCGTTCTAAATTTACTTCAGGAATTGTCAAATTCAAATTATCCTGGGGGCAAGATTGATTGGAATGAGTTGGTCAAAAGTACAGGAACTGGGATATCAAATGCTCGAGAGTATCAGATGTTATGGCGTCATCTAGCGTATCGTGAAGACTTGACTGAAAATCTGGAAGACGGGGCTGAACCTCTGGATGATGATAGTGACTTGGACTGTGAGATGGAAGCGGTACCCCCTATAAACAATGATGCTGCATCAGAGGCTTCAGCTTGTGTTAAGGTTATGATAGCCTCAGGTTCACTCAGTGAAAGGGGTCCTAGTAGCTCAACAATTGAGGCTCCGATGACTATACATATTCCAAATTGTCATTCATCTACAAATCCTGAAGAAAATATACAGCACTTAAACTCAATACAAGGAACTAGTGTTATTTTTCCTGTTACTGTTCAGAGACAGACAGTACCAACTGGATCTGTGACCGAAAGTGTAGAGGCCAAGGGAACATCCGGTGGCAAATTGCCTTCCAAAAGGAGAAGAAAAGCATGGTCAGAAGAGGAGGACAAGCAACTTCGAGAGCTTGTTCAGAAATGTGGTGAGGGAAATTGGGCAACCATGTTGAAAGGAGATGACTTCCCTATCAAAAGAAGTCCTACACAGCTGGCCCAGAGGTGGAGCATTTTACGAAAGAAGGATGGCACTACAAATACGGGAGCAAACCTGACCAGCTCACAATATACTGCTGTACAGCTAGCAACTCGTCACTCGTTATCTTTAGCCCTTGACATGCCATTAAAGAAATTAACTGCTCCTGGAACGACAGACACGGGTAGGGTGTCATTAAATGGATCAATTAAGAACCCTGTGCAACCTATCAACACTGCTGAAGTATCAACAGTTCAGAGCAGCTCTGTGCCACCTCAGCTTCCATCTCAACAAGCTGTGTTGGGTTCTTCTGCTTCCCCAGCAAATTCTTTAGTCCCTGAAAGAACAATGCTGAAGTCTAATACAAGTGTTGATGCTGCTGTAAGAGCTACTGCAGTTGCAGCTGGTGCACGTATTGTCTCCCCGACTAATATTTTGTCAGTGCAAAAGTCTACTCAGGACAGAAGCGCTGGACAAATTATGCCCTCAGGCAATTCCTCGATGAAACGGTCTGCATCTGCTGGTTCTGTCATCAACCCCAAAGCTCTTATAAATACATCCGTTTCTCCTAAAGCTGTTGCCACTGCATCTCCTCCCTGCACTACGACTGTTAAATCTATCTCCCCATCAGGTGATAAAACTTCTGATGCTCATACTCTTCGCTCAGTGGTCAATAATCTTCCATTGGAACAAGTTAATCGTGACCAAGAATCAAAAGTCTCTGATTCTAGTGTTGAAACAAAAAAGAGGGATCAAGTTGGTGGGGCGCTAGTCACAGAAAATATACCTAATGAGGAAGTTTTAGAAGTTAAACTAGTCTCACAAAATCCAGGAGAATGA 1560 0.4359 MLEDDKKNKKVAFSEEDAAALLVKYDATTVLNLLQELSNSNYPGGKIDWNELVKSTGTGISNAREYQMLWRHLAYREDLTENLEDGAEPLDDDSDLDCEMEAVPPINNDAASEASACVKVMIASGSLSERGPSSSTIEAPMTIHIPNCHSSTNPEENIQHLNSIQGTSVIFPVTVQRQTVPTGSVTESVEAKGTSGGKLPSKRRRKAWSEEEDKQLRELVQKCGEGNWATMLKGDDFPIKRSPTQLAQRWSILRKKDGTTNTGANLTSSQYTAVQLATRHSLSLALDMPLKKLTAPGTTDTGRVSLNGSIKNPVQPINTAEVSTVQSSSVPPQLPSQQAVLGSSASPANSLVPERTMLKSNTSVDAAVRATAVAAGARIVSPTNILSVQKSTQDRSAGQIMPSGNSSMKRSASAGSVINPKALINTSVSPKAVATASPPCTTTVKSISPSGDKTSDAHTLRSVVNNLPLEQVNRDQESKVSDSSVETKKRDQVGGALVTENIPNEEVLEVKLVSQNPGE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00471 519 MobiDBLite consensus disorder prediction 475 489 - -
Accr3g00471 519 MobiDBLite consensus disorder prediction 324 348 - -
Accr3g00471 519 CDD SANT_TRF 206 255 - -
Accr3g00471 519 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 489 - -
Accr3g00471 519 SMART sant 204 256 IPR001005 -
Accr3g00471 519 MobiDBLite consensus disorder prediction 433 457 - -
Accr3g00471 519 ProSiteProfiles Myb-like domain profile. 200 254 IPR001005 -
Accr3g00471 519 Pfam Myb-like DNA-binding domain 205 250 IPR001005 -
Accr3g00471 519 MobiDBLite consensus disorder prediction 182 212 - -
Accr3g00471 519 MobiDBLite consensus disorder prediction 472 500 - -
Accr3g00471 519 SUPERFAMILY Homeodomain-like 203 256 IPR009057 -
Accr3g00471 519 Gene3D - 199 260 - -
Accr3g00471 519 MobiDBLite consensus disorder prediction 389 412 - -
Accr3g00471 519 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 258 IPR017930 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr3g00471 Myb_DNA-binding 3.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00471 - - gmx:100805773 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00471 3 5186707 5194815 Accr3g00471 3 5186707 5194815 ECH