Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00465 ATGCAGCTGTCTCACGACATTAGGGCCTTCGATAATAGTGGATGCTGCACCTTTCATCATAAACCAATGGGTGTTGGTCGATTACATCTGGTTACCATCAATCTTTTGCCGCATGGTTTGAGGCGTGATTCATCAGCTCTCCATCTTTTAAGTAAAGTACATGCCCCGTTAAGGCCTGTTCCTACCAGATGTAATGTTTTATTGTGCCGTTCCATATTACTGCCGAACGGAGGGAGTTGGACCCCCTTAACGAAATCTGCTTCTGTTATCTTGAAGAGGTCATATGATGCTTTGCAAGGAAGCCCTGTCACTACTCAATTGATCCCAGCCCTTGGTGTCATTGCCTTTGCTGTTTGTGGCCTTGAACCTCTTATGCGTCTGTGCAGGATTATCTTTCTCCAAAGGAATGATAATACTTGGAAGAAAAGTCGTTCGCGTGATATTATGATGTCTTATTTGCAGCCTTTGCTGCTGTGGACTGGGGTTATGCTCGTCTGCAGGGCATTAGATCCACTAAACCTCCCATCAGAAGCCAGCCAGGCTGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTCTGTCAACTGTGCTCTCATTTGCTTACTGTTTTTCAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAGGCAAACGAATCCAATGATGCGAGAAATATGGGATTTGATTTTGCTGGGAAAGCTGTGTATACTGCCGTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTACTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACAAAGATTGACGGATATGAGGTTTCTGGTATTGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGCGGAATCTTACCCAGAGAACTCATTGGCGTGTCAAGACTCACCTCGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTTTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCACGTCGATACTGAAAATCAGTCTCTAATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTTTGTGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACACCCATTCGCACAGTCCAGAAAATATACAGCGAGGCTGACTTGGAAAACATTCCATTTGGTGACCCCATTTTTACTCGCTCCAGAGCAGCAGCAAATCGCCCATTTCTACTGATAGAGCCACCTTCCAAAGTTAATGGTGAAGATAGAGCCAAGGCTCCTACTCGTTCAACACGCTCTAGTGAAGAAAAAGATGCCAAAATTGATGAAACATCGACATCTGATTCCAAAGATGACAATCTTGTCGTGACATCAACATCCACTGCAAACTCCAGGGATAAATCGAAGTCAATCTCTGAAGCACAAGCTCAGAATATGGGTTCTGATGGTACTGTCCAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTGCTGTAGATGCAGGGAAGGGGCCTGCTGCCCCAGTAAATAAAGACCTTGCTCAAAGTGTTGCCCCTGAAAATTGTTCGGCTTCTTCACATGAGTTTGCTGGAAGGGGAGATACTACTCCTGCTACATCTTTACAGGCGAAGCAGGATGAAGACAAATATGCTGTATCCTCCTCACCGGCTAGGCCTTCCCTGGAAGAAAATATTGTTCTTGGTGTTGCCCTTGAGGGCTCAAAACGGACTCTTCCAATTGACGAAGAAATGACTCCACCTTCCATCCCCACTGAGGCACAAGAATTTGCCGCCCAAAGAAATGGAAATGGATCTTCTGGCAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCAGAGTGATTAG 2085 0.4408 MQLSHDIRAFDNSGCCTFHHKPMGVGRLHLVTINLLPHGLRRDSSALHLLSKVHAPLRPVPTRCNVLLCRSILLPNGGSWTPLTKSASVILKRSYDALQGSPVTTQLIPALGVIAFAVCGLEPLMRLCRIIFLQRNDNTWKKSRSRDIMMSYLQPLLLWTGVMLVCRALDPLNLPSEASQAVKQRLLNFVRSLSTVLSFAYCFSSLIQQAQKFFMEANESNDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRVKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVDTENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDPIFTRSRAAANRPFLLIEPPSKVNGEDRAKAPTRSTRSSEEKDAKIDETSTSDSKDDNLVVTSTSTANSRDKSKSISEAQAQNMGSDGTVQKTSKTTQPKKESAVDAGKGPAAPVNKDLAQSVAPENCSASSHEFAGRGDTTPATSLQAKQDEDKYAVSSSPARPSLEENIVLGVALEGSKRTLPIDEEMTPPSIPTEAQEFAAQRNGNGSSGKDKKDGQISTKQQSD 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00465 694 Gene3D - 291 344 IPR023408 -
Accr3g00465 694 Pfam Mechanosensitive ion channel 233 440 IPR006685 GO:0016020|GO:0055085
Accr3g00465 694 MobiDBLite consensus disorder prediction 521 567 - -
Accr3g00465 694 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 689 IPR045042 -
Accr3g00465 694 Gene3D - 185 290 - -
Accr3g00465 694 SUPERFAMILY Sm-like ribonucleoproteins 276 346 IPR010920 -
Accr3g00465 694 MobiDBLite consensus disorder prediction 489 520 - -
Accr3g00465 694 MobiDBLite consensus disorder prediction 484 694 - -
Accr3g00465 694 MobiDBLite consensus disorder prediction 588 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00465 Accr-Chr3 5130325 5136530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00465 1 669 Mechanosensitive Ion Channel Family AT1G58200 54.124 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00465 K22047 - gmx:100796022 1007.28