Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00464 ATGATGACCTATGTAGGTTCAATGCAGCTGTCTCACGACATTAGGGCCTTCGATAATAGTGGATGCTGCACCTTTCATCATAAACCAATGGGTGTTGGTCGATTACATCTGGTTACCATCAATCTTTTGCCGCATGGTTTGAGGCGTGATTCATCAGCTCTCCATCTTTTAAGTAAAGTACATGCCCCGTTAAGGCCTGTTCCTACCAGATGTAATGTTTTATTGTGCCGTTCCATATTACTGCCGAACGGAGGGAGTTGGACCCCCTTAACGAAATCTGCTTCTGTTATCTTGAAGAGGTCATATGATGCTTTGCAAGGAAGCCCTGTCACTACTCAATTGATCCCAGCCCTTGGTGTCATTGCCTTTGCTGTTTGTGGCCTTGAACCTCTTATGCGTCTGTGCAGGATTATCTTTCTCCAAAGGAATGATAATACTTGGAAGAAAAGTCGTTCGCGTGATATTATGATGTCTTATTTGCAGCCTTTGCTGCTGTGGACTGGGGTTATGCTCGTCTGCAGGGCATTAGATCCACTAAACCTCCCATCAGAAGCCAGCCAGGCTGTGAAGCAACGGCTGCTGAATTTTGTGAGATCTCTGTCAACTGTGCTCTCATTTGCTTACTGTTTTTCAAGCTTAATTCAACAAGCACAAAAATTCTTTATGGAGGCAAACGAATCCAATGATGCGAGAAATATGGGATTTGATTTTGCTGGGAAAGCTGTGTATACTGCCGTATGGGTTGCTGCTGTATCATTGTTCATGGAGCTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGTACAGTACTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACAAAGATTGACGGATATGAGGTTTCTGGTATTGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCTAATCACAAGTTCACTGTCAATGTTGTGCGGAATCTTACCCAGAGAACTCATTGGCGTGTCAAGACTCACCTCGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTTTGGTGGAGCAACAAAAGTTGCACAGAAGGGTTTTTCTTGAGCACGTCGATACTGAAAATCAGTCTCTAATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTTTGTGTCCAGGAGGCCATCCTTTTGGATCTTCTGAGAGTTATTAGTCATCATCGAGCCCGGCTAGCCACACCCATTCGCACAGTCCAGAAAATATACAGCGAGGCTGACTTGGAAAACATTCCATTTGGTGACCCCATTTTTACTCGCTCCAGAGCAGCAGCAAATCGCCCATTTCTACTGATAGAGCCACCTTCCAAAGTTAATGGTGAAGATAGAGCCAAGGCTCCTACTCGTTCAACACGCTCTAGTGAAGAAAAAGATGCCAAAATTGATGAAACATCGACATCTGATTCCAAAGATGACAATCTTGTCGTGACATCAACATCCACTGCAAACTCCAGGGATAAATCGAAGTCAATCTCTGAAGCACAAGCTCAGAATATGGGTTCTGATGGTACTGTCCAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTGCTGTAGATGCAGGGAAGGGGCCTGCTGCCCCAGTAAATAAAGACCTTGCTCAAAGTGTTGCCCCTGAAAATTGTTCGGCTTCTTCACATGAGTTTGCTGGAAGGGGAGATACTACTCCTGCTACATCTTTACAGGCGAAGCAGGATGAAGACAAATATGCTGTATCCTCCTCACCGGCTAGGCCTTCCCTGGAAGAAAATATTGTTCTTGGTGTTGCCCTTGAGGGCTCAAAACGGACTCTTCCAATTGACGAAGAAATGACTCCACCTTCCATCCCCACTGAGGCACAAGAATTTGCCGCCCAAAGAAATGGAAATGGATCTTCTGGCAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCAGAGTGATTAG 2106 0.4402 MMTYVGSMQLSHDIRAFDNSGCCTFHHKPMGVGRLHLVTINLLPHGLRRDSSALHLLSKVHAPLRPVPTRCNVLLCRSILLPNGGSWTPLTKSASVILKRSYDALQGSPVTTQLIPALGVIAFAVCGLEPLMRLCRIIFLQRNDNTWKKSRSRDIMMSYLQPLLLWTGVMLVCRALDPLNLPSEASQAVKQRLLNFVRSLSTVLSFAYCFSSLIQQAQKFFMEANESNDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRVKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVDTENQSLMILISCFVKTSHFEEYLCVQEAILLDLLRVISHHRARLATPIRTVQKIYSEADLENIPFGDPIFTRSRAAANRPFLLIEPPSKVNGEDRAKAPTRSTRSSEEKDAKIDETSTSDSKDDNLVVTSTSTANSRDKSKSISEAQAQNMGSDGTVQKTSKTTQPKKESAVDAGKGPAAPVNKDLAQSVAPENCSASSHEFAGRGDTTPATSLQAKQDEDKYAVSSSPARPSLEENIVLGVALEGSKRTLPIDEEMTPPSIPTEAQEFAAQRNGNGSSGKDKKDGQISTKQQSD 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00464 701 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Accr3g00464 701 MobiDBLite consensus disorder prediction 528 574 - -
Accr3g00464 701 MobiDBLite consensus disorder prediction 496 527 - -
Accr3g00464 701 MobiDBLite consensus disorder prediction 491 701 - -
Accr3g00464 701 Gene3D - 192 297 - -
Accr3g00464 701 MobiDBLite consensus disorder prediction 595 628 - -
Accr3g00464 701 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 696 IPR045042 -
Accr3g00464 701 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Accr3g00464 701 Gene3D - 298 351 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00464 Accr-Chr3 5130325 5136551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00464 1 676 Mechanosensitive Ion Channel Family AT1G58200 53.868 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00464 K22047 - gmx:100796022 1011.13