Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00443 ATGGCACCCAGTTTCGATTGCGTTTCAAGTCTTCTTTGTACAGAGGACGATATCATATTCGATGATAACGATTGCGAGAGTACGATGGGGATGCCTGAGAATCCGTGGCATCAAATATCCCATCGGCTCCACAATCCGAGCCTTTTATTCGATGATATAACTGGGTTGCCATTGCAGAGTGATGAGTGTTTGGCGATAATGGTGGAAAAAGAATGCCAGCACATGCCTGCTGGCGATTACCTGAATAAACTACGGACTGGTGTTTTGGACTCTGGGGCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCTTGCACATTTCCATTTTGGACCTCTCTCTGCATATTTATCCATAAACTACATGGATCGCTTCCTGTCTCTATATGAATTACCAAAGGGAAAATCTTGGTCAATGCAATTGCTGGCCGTGGCATGCTTATCTCTGGCAGCCAAACTAGAGGAGAATAAAGTTCCCCTGTGTGTTGATTTGCAGGTGGCTGAATCAAAATTTATATTTGAAGCCAGAACAATCCAGAGAATGGAGCTTCTCATACTAAGCACACTTAAGTGGAGAATGCAAGCAATTAGCCCTTTCTCCTTCATAGAACATTTCATAAGCAAGATCAATGAAGATCAAACTCCACTAAGAACTTCTACAACAAAATCTATCCAACTTATATTGAATACTGTGAGAGGGATTGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTGGCAATATTTGTTGTGGGGGGCACCCAAACAGTTAACGCAGAGAAAGCTATCTCTGTTCTTGCTCAACACGTAGATAAGGAGAGAGTCTTGAAGTGTTTTAAAGTGGTGCAAGAGTTGTCATCAAACAGCAGCACCAGCAGTTCTTCTGGTGCTTCTGTTCCTCGAAGCCCAATTGGAGTGCTGGATGCAGCATGCTTGAGCTATAAAAGTGATGAAGCAGACGGTTCATGTTCAAGTTCTTCGCATACTAATAGTCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCAGTGGAACTGATCAATAA 1050 0.4276 MAPSFDCVSSLLCTEDDIIFDDNDCESTMGMPENPWHQISHRLHNPSLLFDDITGLPLQSDECLAIMVEKECQHMPAGDYLNKLRTGVLDSGARKEAIDWIEKVLAHFHFGPLSAYLSINYMDRFLSLYELPKGKSWSMQLLAVACLSLAAKLEENKVPLCVDLQVAESKFIFEARTIQRMELLILSTLKWRMQAISPFSFIEHFISKINEDQTPLRTSTTKSIQLILNTVRGIDSLEFKPSEIAAAVAIFVVGGTQTVNAEKAISVLAQHVDKERVLKCFKVVQELSSNSSTSSSSGASVPRSPIGVLDAACLSYKSDEADGSCSSSSHTNSPDAKRRKLNKTSGTDQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00443 349 FunFam D2/4-type cyclin 77 189 - -
Accr3g00443 349 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Accr3g00443 349 SUPERFAMILY Cyclin-like 178 253 IPR036915 -
Accr3g00443 349 SMART cyclin_7 99 187 IPR013763 -
Accr3g00443 349 Pfam Cyclin, C-terminal domain 197 295 IPR004367 -
Accr3g00443 349 SMART Cyclin_C_2 196 333 IPR004367 -
Accr3g00443 349 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Accr3g00443 349 Gene3D - 65 282 - -
Accr3g00443 349 Gene3D - 77 194 - -
Accr3g00443 349 MobiDBLite consensus disorder prediction 319 349 - -
Accr3g00443 349 SUPERFAMILY Cyclin-like 51 193 IPR036915 -
Accr3g00443 349 MobiDBLite consensus disorder prediction 333 349 - -
Accr3g00443 349 CDD CYCLIN_AtCycD-like_rpt2 196 282 - -
Accr3g00443 349 PANTHER CYCLINS 61 292 IPR039361 -
Accr3g00443 349 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Accr3g00443 349 FunFam D6-type cyclin 190 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00443 Accr-Chr3 4938866 4940727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00443 67 320 Core Cell Cycle Gene Families AT2G22490 47.170 1.36e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00443 K18810 - qsa:O6P43_015367 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00443 3 4938866 4940727 Accr3g00443 3 4938866 4940727 ECH