Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00442 ATGGGAAAAGATTTTGGAACCTGGATACCGCAAGAGCATTTGGATTGTCAATCACCAAATACGGGTTCCTTTGGCGCTAACCCTGACGTGGGGAAGCAAAATGATTATGCATTTATGAACACTGGCATAAATATGATGTCTGAAAATTATACAATGCCAGACTATGCAACCCCCATGCTACCACATTCGCAGTTAGGACGGTCTAATGAACCTTATGGTTATGGTTCACCTCACTTTCGACAGGCATTCATGCCCGCTCCAAACTTCACTTTGGAGAGCAAGCTCCCTGCTGGCCAGAAAAAAGTTATTAGGGAGGAAATTGCACCCGATCGGATGCTGGGCTTCCCTAAGAAGCAGTTCATCGTAATTGACCAGACTGTCAATCAAACAACATTTGTATATTGTCCTGGGTTTGGAAGTCCCATTGAATGCCTTGCTTCTTGGCATTCAAAGATGCATGGTCCTGACTATTTGAATGGGAATGAACCTTCTTTAGGAAGAGATTTGAATAATCTGAATGGACCAACTTTGACTGATAAAGCTGATAAAAATCAGGGAACTGAGGTCCAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCGTTACTTTACTCTGATAGTGATGGTTACTCCACAGAGGATGATGAAGTTACCAGCACAGGGCATTCGCCCAGTATTATGACCACTCATGATGACCAAGACTTCTTTTTCGGAAGCAATGAAGGAGTTGGTAGCTGCAATGAAGAAGTTGGTAGCTCTGCAGGGAAAACAAAGAAGCGTAAGCTGTCAGAGGATGTGGCTTATGATGACTTACAGCTCATGGACAGTGCTAGTTCTCTGAATCTGAATAGATCCTTTGATAACGGATATGATGCTGAATCAAGATGTTCAAGTGGCAGCAGTCAAGGATCAGACTACAAGAAGATGAGAAAAGAGAAGATACGAGATGTTCTAAACGTTCTGAAAACCATAATTCCTGGTGGAAAAGAAAGGGATCCAATTTGGCTTCTTGATGAAGCGATATGTTGCCTGAAATCATTGAAACTCAAGGCTAGAGCTCTAGGACTCCCTGACTTGTGA 1083 0.4266 MGKDFGTWIPQEHLDCQSPNTGSFGANPDVGKQNDYAFMNTGINMMSENYTMPDYATPMLPHSQLGRSNEPYGYGSPHFRQAFMPAPNFTLESKLPAGQKKVIREEIAPDRMLGFPKKQFIVIDQTVNQTTFVYCPGFGSPIECLASWHSKMHGPDYLNGNEPSLGRDLNNLNGPTLTDKADKNQGTEVQSEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSIMTTHDDQDFFFGSNEGVGSCNEEVGSSAGKTKKRKLSEDVAYDDLQLMDSASSLNLNRSFDNGYDAESRCSSGSSQGSDYKKMRKEKIRDVLNVLKTIIPGGKERDPIWLLDEAICCLKSLKLKARALGLPDL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00442 360 MobiDBLite consensus disorder prediction 164 184 - -
Accr3g00442 360 PANTHER TRANSCRIPTION FACTOR BHLH145 8 357 IPR037546 -
Accr3g00442 360 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 299 348 IPR011598 GO:0046983
Accr3g00442 360 MobiDBLite consensus disorder prediction 159 196 - -
Accr3g00442 360 MobiDBLite consensus disorder prediction 208 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00442 Accr-Chr3 4892362 4893444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00442 72 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.612 1.19e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00442 - - aprc:113846036 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00442 3 4892362 4893444 Accr3g00442 3 4892362 4893444 ECH