Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00439 ATGGGCTTCCTCTCCTGCAATGCTGAATCCGCAGCCGCCACCTGTGATTCCCACTACTGGGACCTCAAGAAGAGGAGTTCCAACTCAACCAGGAGAAGATCAACTCATCACAAGCATAACCTCGTTGAGATCAGGGAGTTTCAGTTCTCGGAGATCCTCGCAGCCACCGGCGGCTTCTCCGCTGACAGCTTCCTCGGCAAAGGCAGCCATGGCAGTGTCTACAAAGCTACCCTCGACGACGGCAAGCTTATCGCTGCCGTCAAAACAACAAAGTTCTCCAAGCCTCAGCTCACTACCCTCCGCAACCACTCCGCAAACTGTACCGGCTGTGCTAATTGTACAAGCCCTGCCGAGAACGAGATCGAGATTCTCTCTCGGGTTCGAAATCCTCGCCGCTTCGTCAACCTCATTGGATTTTGCAATGACTCCAGCGGGAATCTGGTTCTTGTAGTTGAGTATATGCTCAACGGTTCTCTCTACGATGCCTTGCACTCCAACACCAGACCGCCAGGTTGGAACCGGCGGGTTCGGTTCGCTCTGCAGGTGGCAAAAGCTGTGCTGGCGCTTCACTCCTCGAATCCGCCGGTGATTCACAGAGACATAAAGTCGTCCAACGTTCTGATCGACGAGAAGGGAAAGGCGAGGCTGGGCGATTTCGGCCTGGCACTGAGGGGACACGTGGAGGACGTTCGGGTGAAATGCACACCGCCGGCGGGGACGATGGGATACCTGGACCCGTGCTACCTGGCGCCGGGGGATCTGAGCACGAAGAGCGACGTGTTCAGCTTCGGGATCTTGCTGTTGGAGATCATCAGCGGAAGGAACGCAATCGATTTGAATTACAGCCCGCCCTCCGTGGTGGACTGGGCGGTGCCGTTGATAAAGCGCGGGGAGTTCCTCGGAATCTGTGACCGGCGAATTGGGAGGCCGTCAGACATGGCGATTATAAGGCAGCTGGGGACGTTGGCGGCGAAGTGCGTGAGGTCGACGGCAGAAAAGAGGCCGTCAATGTCGGAGGCAGTGGAGTGGCTGGAACAGGTGAGGAAGAGGATGCAGGCGACGCCCATATGGAGGGGTCTGAGGCGGCGGGAGGAGAATGAAGCAGAATCGGGCGATAGGAGAGAGGAAGTAGGGGGAGGAATAGTGAGAGGGGGAAGCAGAAGGAACGGGAAAGTGTCAAGCGTGGGTGGTGCGGAGCAAGAGAACGAGATGAGTAAAGCCTGCAACAATGGAGTCTGGAGGTCGAGATCAATGCCCAACGGGGATGTGGGTGGCATTATTGCGAGGAGCCTCAACAGATCAAGGTCCATGTCCATGGAGGGTTTTGCAAATTAA 1335 0.5655 MGFLSCNAESAAATCDSHYWDLKKRSSNSTRRRSTHHKHNLVEIREFQFSEILAATGGFSADSFLGKGSHGSVYKATLDDGKLIAAVKTTKFSKPQLTTLRNHSANCTGCANCTSPAENEIEILSRVRNPRRFVNLIGFCNDSSGNLVLVVEYMLNGSLYDALHSNTRPPGWNRRVRFALQVAKAVLALHSSNPPVIHRDIKSSNVLIDEKGKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPCYLAPGDLSTKSDVFSFGILLLEIISGRNAIDLNYSPPSVVDWAVPLIKRGEFLGICDRRIGRPSDMAIIRQLGTLAAKCVRSTAEKRPSMSEAVEWLEQVRKRMQATPIWRGLRRREENEAESGDRREEVGGGIVRGGSRRNGKVSSVGGAEQENEMSKACNNGVWRSRSMPNGDVGGIIARSLNRSRSMSMEGFAN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00439 444 Gene3D Phosphorylase Kinase; domain 1 29 153 - -
Accr3g00439 444 ProSiteProfiles Protein kinase domain profile. 59 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00439 444 SMART serkin_6 59 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00439 444 SUPERFAMILY Protein kinase-like (PK-like) 43 355 IPR011009 -
Accr3g00439 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Accr3g00439 444 FunFam Serine/threonine-protein kinase-like protein 154 357 - -
Accr3g00439 444 MobiDBLite consensus disorder prediction 363 405 - -
Accr3g00439 444 MobiDBLite consensus disorder prediction 363 381 - -
Accr3g00439 444 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Accr3g00439 444 Pfam Protein kinase domain 62 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00439 444 Gene3D Transferase(Phosphotransferase) domain 1 154 361 - -
Accr3g00439 444 PANTHER OS01G0750732 PROTEIN 23 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00439 Accr-Chr3 4856875 4858209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00439 45 403 Receptor kinase-like Gene Family AT3G59420 36.883 1.44e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Accr3g00439 Pkinase 5.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00439 - - pcin:129303265 741.88