Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00437 ATGGAATTTGAGGAGCACGACGAGCAAGACGACGACATCGAGATCCCGGTGTCGCCTCCTGCTTACGACTCCCTCCCCAACAACTCTGTCCCCAGGTCCAAACTAAACGTCTCCGGAGCACCGGCAGGAGAGGATACTGGCACCTCCGCCGTCACCCCTGGCCGTAAAGCTGAGCCCGCCAGGTACCGAGAATGCCAAAAGAACCACGCCATCGGCCTCGGTGCACACGCGGTCGACGGCTGCGGAGAGTTCATCCCGGCGGGAGAGAAAGGCACGCTCGACGCTCTTAAATGCGCCGCTTGTAACTGTCACCGCAATTTCCACCGCAAGGAGACAGACAGCGGGGAGATGACCCCGTATCAGCCTCAGCCTCCGCCTCCGCCGCCGCCTCACTACCAGTACCACCAGCAGTATCCCCCATACTATCGTGCGCTGCCGCCTCCAGCTGGGTACCTCCACCACCATCTAACAGCTCAACCGATGGCGCTGCAGCGGTCGTTGGCTCTGCCAGCGCCGATTAGAGACGAAGAGGACATGTCGAATCCGAGCAGCAGCGGAGGCGGCGGAAGTGGCGGTGGGGGAGGGAAGAAAAGGAGCAGGACCAAGTTCACGCAGGAGCAGAAGGATAAGATGCTGGAATTCGCGGAGCGGGTCGGGTGGAGGATCCAGAAGCATGATGAAGCTGCGGTGGAGCAATTCTGTGCGGAAGCTGGTGTCAAGAGACATGTACTTAAGGTTTGGATGCACAATAACAAGAACACTCTGGGTTTTATTTTTCATTTTCAGACTTCGTACCAAAAGGAAGAATAG 810 0.5802 MEFEEHDEQDDDIEIPVSPPAYDSLPNNSVPRSKLNVSGAPAGEDTGTSAVTPGRKAEPARYRECQKNHAIGLGAHAVDGCGEFIPAGEKGTLDALKCAACNCHRNFHRKETDSGEMTPYQPQPPPPPPPHYQYHQQYPPYYRALPPPAGYLHHHLTAQPMALQRSLALPAPIRDEEDMSNPSSSGGGGSGGGGGKKRSRTKFTQEQKDKMLEFAERVGWRIQKHDEAAVEQFCAEAGVKRHVLKVWMHNNKNTLGFIFHFQTSYQKEE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00437 269 Gene3D - 181 256 - -
Accr3g00437 269 NCBIfam homeobox domain, ZF-HD class 196 253 IPR006455 -
Accr3g00437 269 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 49 255 - -
Accr3g00437 269 MobiDBLite consensus disorder prediction 174 204 - -
Accr3g00437 269 FunFam Zinc-finger homeodomain protein 2 185 257 - -
Accr3g00437 269 SUPERFAMILY Homeodomain-like 183 254 IPR009057 -
Accr3g00437 269 MobiDBLite consensus disorder prediction 110 132 - -
Accr3g00437 269 MobiDBLite consensus disorder prediction 1 60 - -
Accr3g00437 269 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 61 111 IPR006456 -
Accr3g00437 269 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 111 IPR006456 -
Accr3g00437 269 Pfam ZF-HD protein dimerisation region 61 112 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00437 Accr-Chr3 4836082 4839296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00437 1 255 ZF-HD Transcription Factor Family AT4G24660 49.618 1.51e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr3g00437 ZF-HD_dimer 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00437 - - pcin:129294191 281.567