Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00429 ATGTTTACGAGGAAGAAAAGGAAAGGAAGTGAGACAGATGCATCCTCAAATATCCCAGAAATCTTGACTTCACATCATGGGAACCATGAATCGCTGTCATCAAATTTGAGGCCTCATTACTCGCTTGAAGATTGTTCCAGATTGAAGAAGAGGTGTAAAGAAGATGCTGATGCAGAGCCGGTTGCTTCCTGTAATAAAAGGCTTGCAGGCTTTGCCACCGCTCCACCTTGTGGGACATCATCTTTGATCACTCCTGGAAGAGGTCTTAAGAGGAAGATAGGATGCATTGATGTTGCCACCCAAATGGGCAGGAAGAAAAAGATAGAGGATGATTATGTTTCTGGTGAAACAATTGGACAGGGCAAATTTGGATCTGTATCTTTGTGTCGGTCCAGGCTTAGTGGAGCAGAATATGCATGTAAGACACTGAGGAAGGGGGAGGAGACTGTTCATCGAGAAGTGGAGATAATGCAACACTTATCTGGACATCCTGGGGTTGTGACGCTGCAGGCAGTGTATGAAGAAGCTGACTGCTTCCATCTTGTAATGGAGTTGTGTTCTGGAGGGCGATTGATTGATAGGATGGTTAAGGAGGGCCCTTATACAGAGCAAAGGGCTGCTAATGTAATCAAGGAAGTGATGTTAGTCATTAAGTATTGCCATGATATGGGAGTTGTGCACAGAGATATCAAACCTGAAAATATCCTTCTAACAGCAACAGGAAAAATAAAGCTTGCAGATTTTGGGCTGGCCATGAGAATATCTAATGGTCAGAACTTGACTGGTTTAGCTGGAAGCCCTGCATATGTTGCTCCAGAGGTATTGCTGGGTAGCTATTCTGAGAAGGTGGATGTATGGAGTGCTGGAGTTCTCCTGCACGCTCTGTTAGCTGGCTTTCTTCCATTTCATGGAGATTCGTTGGAAGCAATCTTCGAGGCTATTAAGGATGTTAAACTGGATTACCAAAAGGGTATGTGGGAACCGGTATCTAAGCCTGCCCGAGATCTTGTTGGGAGGATGCTGACAAGGGATGTTCAAACAAGGATCACAGTTGATGAAGTACTTGCGCATCCATGGATACTATTCTACACAGAACCTACTTTAGAAAAACTGCCCATCAGAACAAGGTTGAAGCATCAAATAGGAGCCACTTGCTGCTGCTGCCAGTTTATTGCACCTGGACTGAGGTCCGGAGGAAACAAGATAGACGACGGTTCCCTTGGTGAAATTTCAAGCCCGCTTTCATCCTCGGAGTCGGATAGCAGCAATTCAGAAGATGAGGGCGATGGTGTGTTGATTGATGTGCTGGCATCTGCGATTTCACATGTGAGGATATCCGAACCCAAGAGAAGCAGGTTGTGTGGACCAACAGGTCCAATGGATCAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1434 0.4526 MFTRKKRKGSETDASSNIPEILTSHHGNHESLSSNLRPHYSLEDCSRLKKRCKEDADAEPVASCNKRLAGFATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVSLCRSRLSGAEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCFHLVMELCSGGRLIDRMVKEGPYTEQRAANVIKEVMLVIKYCHDMGVVHRDIKPENILLTATGKIKLADFGLAMRISNGQNLTGLAGSPAYVAPEVLLGSYSEKVDVWSAGVLLHALLAGFLPFHGDSLEAIFEAIKDVKLDYQKGMWEPVSKPARDLVGRMLTRDVQTRITVDEVLAHPWILFYTEPTLEKLPIRTRLKHQIGATCCCCQFIAPGLRSGGNKIDDGSLGEISSPLSSSESDSSNSEDEGDGVLIDVLASAISHVRISEPKRSRLCGPTGPMDQQGSSNMKANNLCKAF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00429 477 SUPERFAMILY Protein kinase-like (PK-like) 109 383 IPR011009 -
Accr3g00429 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Accr3g00429 477 MobiDBLite consensus disorder prediction 402 428 - -
Accr3g00429 477 FunFam Serine/threonine-protein kinase PEPKR2 103 431 - -
Accr3g00429 477 MobiDBLite consensus disorder prediction 14 36 - -
Accr3g00429 477 Pfam Protein kinase domain 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00429 477 MobiDBLite consensus disorder prediction 1 36 - -
Accr3g00429 477 SMART serkin_6 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00429 477 CDD STKc_CAMK 111 359 - -
Accr3g00429 477 PANTHER SERINE/THREONINE-PROTEIN KINASE 99 379 - -
Accr3g00429 477 ProSiteProfiles Protein kinase domain profile. 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00429 477 Gene3D Transferase(Phosphotransferase) domain 1 103 384 - -
Accr3g00429 477 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00429 Accr-Chr3 4786609 4788966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00429 96 359 EF-hand Containing Proteins AT2G38910 44.364 6.65e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr3g00429 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00429 - - pcin:129303422 844.343