Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00423 ATGGCACTTGAGGCCGTGGTGTTCCCACAAGATCCATTCAACTATAGTCACATGTTAGGACTTGGTTCTGGTATAGAAGCAGAACAAGAGAGAGGCTTTGTTGGGATCACAGGCAATAATAATGCGAATTGGGATTATTCTTGGGTGTTGCAGGACGTGAAGGGGTCATGGGACAGCTCTAACTCATCTCCACAACAATCTGTTGTGTCCCCTCCGACGGCTTCTTCCACAGGAGGAGGACGACGCAAACGACGTCGCATCAAGACCACCAAGAACCAGGAGGAAATCGAGAGCCAGAGGATGACCCACATTGCCGTGGAGCGTAATCGCCGGAAGCAGATGAATGAGTACTTGGCCGCGCTCCGATCCTTGATGCCTTCTTCTTATGTTCAAAGGGGTGACCAAGCTTCTATAATTGGAGGCGCCATTAACTTCGTAAAACAGCTGGAACAACATCTTCAGTCGATGCAGGGACAGAGCAAAACAAGGCCACGCACAGAACAGAGCCCCTTTGCCGAGTTCTTCATGTTCCCTCAGTACACAACACCTGCAACTCAGAGCGCCAGCGGCTGTGCGGCGGCGAACGACGTCGTGATGGGACCAAACCAGAAGGAGGTTGGAGCGGCCGACATAGAAGTGAGCTTGGTGGACAGCCACGCCAACGTCAAGATACTCTCCAAGAAACGGCCGGGCCAGCTTGTGAAGATGGTCGTTGGGCTTCAGAGTCTTAGACTCTACATTCTTCACCTTAACGTTACTACGACTCTCGACGATATGGTTATGTACTCTGTTAGCTTAAAGGTTGAGGATGAGAGTCGGTTGAACACAGTAGATGAGATTGCAGCTGCTGTGAATCAATTAATGAGCAGAATTCAAGAAGAGGCTGCTTTCTGTTGA 897 0.5028 MALEAVVFPQDPFNYSHMLGLGSGIEAEQERGFVGITGNNNANWDYSWVLQDVKGSWDSSNSSPQQSVVSPPTASSTGGGRRKRRRIKTTKNQEEIESQRMTHIAVERNRRKQMNEYLAALRSLMPSSYVQRGDQASIIGGAINFVKQLEQHLQSMQGQSKTRPRTEQSPFAEFFMFPQYTTPATQSASGCAAANDVVMGPNQKEVGAADIEVSLVDSHANVKILSKKRPGQLVKMVVGLQSLRLYILHLNVTTTLDDMVMYSVSLKVEDESRLNTVDEIAAAVNQLMSRIQEEAAFC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00423 298 MobiDBLite consensus disorder prediction 57 99 - -
Accr3g00423 298 CDD bHLH_AtFAMA_like 101 169 - -
Accr3g00423 298 PANTHER MAX DIMERIZATION, MAD 69 295 - -
Accr3g00423 298 Gene3D - 88 164 IPR036638 GO:0046983
Accr3g00423 298 MobiDBLite consensus disorder prediction 57 77 - -
Accr3g00423 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
Accr3g00423 298 SMART finulus 104 155 IPR011598 GO:0046983
Accr3g00423 298 Pfam Helix-loop-helix DNA-binding domain 99 150 IPR011598 GO:0046983
Accr3g00423 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 98 166 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00423 Accr-Chr3 4715998 4717079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00423 1 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.519 9.98e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr3g00423 HLH 7.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00423 - - gmx:100797856 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00423 3 4715998 4717079 Accr4g00494 4 4727723 4728876 CCT
Accr3g00423 3 4715998 4717079 Accr3g00423 3 4715998 4717079 ECH