Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00403 ATGGCTCATCATCACCGCTCCCAGTTCGGCGACACCACATTCACCAAAGTGTTCGTGGGAGGACTAGCTTGGGAGACGCCCGCTGATGAAATGCGTAGATATTTCGAGCAGTTCGGATGCATTCTTGAAGCTGTTATCATCAACGATAAGCACACTGGAAAGTCTAAAGGCTATGGATTCGTAACTTTCCGCGATCCAGACTCAGCAAGAAAAGCCTGTGCTGATCCCAAACCTATGATATATGGAAGGAGAGCAAATTGCAATATTGCTTCTCTAGGACGCCCTCCATCTCCTCGAGGAACGAATATATCGGTGCAAGATGGTGGTAAACAAGTCACAGAACGAGAAAAGCCGGCAGCCTATTACAATGGATTTCCGGCAGCGGCAGCGCCACCTTCTCTGATGTACTCAGCAGCGTACAGCTATCCGACCTACATTCCTGATTATGGGTTCCACCAAGCACAATACTATCAACAAATCTATGGACAATCATATTCATATTACTCTGGGTATTGTGTTCAAACACCAAGGCCAAGGGCTGCATTACCATCTGCAGATTCTCGGACCCAGCAACGAAGCTCCTTGGAGGCGACAGCTGGAGTAGGTATAACTTCAGAAAGTGCCAGTAGCCAGGGGAAGAACTGA 645 0.4806 MAHHHRSQFGDTTFTKVFVGGLAWETPADEMRRYFEQFGCILEAVIINDKHTGKSKGYGFVTFRDPDSARKACADPKPMIYGRRANCNIASLGRPPSPRGTNISVQDGGKQVTEREKPAAYYNGFPAAAAPPSLMYSAAYSYPTYIPDYGFHQAQYYQQIYGQSYSYYSGYCVQTPRPRAALPSADSRTQQRSSLEATAGVGITSESASSQGKN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00403 214 MobiDBLite consensus disorder prediction 184 214 - -
Accr3g00403 214 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 17 74 IPR000504 GO:0003723
Accr3g00403 214 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 15 92 IPR000504 GO:0003723
Accr3g00403 214 SMART rrm1_1 16 88 IPR000504 GO:0003723
Accr3g00403 214 MobiDBLite consensus disorder prediction 179 214 - -
Accr3g00403 214 SUPERFAMILY RNA-binding domain, RBD 14 115 IPR035979 GO:0003676
Accr3g00403 214 Gene3D - 2 109 IPR012677 -
Accr3g00403 214 PANTHER BOULE-RELATED 5 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00403 Accr-Chr3 4492214 4494827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00403 11 176 C2H2 Transcription Factor Family AT2G19380 30.120 2.32e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00403 K25006 - gmx:100787086 223.016