Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00370 ATGAGAGAGCAGAGCCACCTGCATCTTGAGGACACTGGTCAGGCAGAGAGGTCTCAGTGGATATTGAATTCACCTAGCCCTCCACCTCTCTGGACTAAGCTGTTGAATCTAAAGGAGGCTATCTTGCTTCGTGGAAACAGCCTTTTTTCTTCATCCAACAACAAAGTTTTCCAAAGACAAGCTGCTTCCTTCTTTCTGAACTTATTCCCAATCCTTAGCTGGATAAGAGACTACAAAGCTTCTACGTTTAAAGATGATCTTTTAGCTGGTTTAACTCTTGCCAGCCTCTGCATACCTCAGAGCATAGGATATGCTACTTTGGCAAGACTTGATCCTCAATATGGCCTGTATACAAGTGTAGTTCCTCCTCTTATCTATGCTGTAATGGGGAGTTCAAGAGAAATTGCAATTGGACCTGTGGCTGTAGTATCGTTGCTGCTATCTTCCCTGCTCTCGCAGGTGGAAGATCCCGTTGCCAACCCCGACGCCTATAGAAACCTTGCCTTCACGGTGACCTTCTTCGCCGGAATCTTTCAAGCATCATTTGGAATTTTTAGGCTGGGTTTTCTGGTGGATTTTCTTTCGCATGCTGCGTTGGTTGGATTCATGGCAGGTGCAGCGATCATGATTGGTCTTCAGCAACTCAAGGGGTTACTGGGAATCACACACTTCACCAACAAAACTGATGCAATATCTGTTTTGGAGTCCGTATACAAGTCACTTCGTCAGCAGCTTACTTCAGGTTCCGCAGATAAATGGTACCCTTTGAATTTTGTGGTGGGATGTTCGTTCCTGATTTTCCTTCTCATTAGCCGAGTTGTTGGAAGAAGAAACAGAAAGCTGTTCTGGTTGCCTGCTATTTCACCTCTTATATCGGTTATCCTGTCAACTTTACTTGTGTATTTGACAAAAGCCGACAAGCACGGAGTTAATATAATAAAGCGCGTCAAAGGAGGCCTGAATCCGAGTTCAGCTCACCTTTTACAATTTCACGGCCAACATTTTGGACAGACAGCTAAAATCGGCTTGATCTCTGCCATCATCGCCCTCACTGAATCTATAGCTGTTGGCCGATCTTTCGCTTCCATAAGAGGGTACAATCTTGATGGAAACAAAGAAATGTTAGCAATGGGGTTCAGCAACATTGCAGGCTCTTTAACTTCCTGCTATGTGGCTACTGGATCATTCTCAAGGACGGCAGTGAATGTGAGTGCGGGATGTAGAACGGCCATATCAAACATTGTGATGGCAGTGACGGTGTTTGTGTCACTAGAATTACTTACAAGGCTATTATACTACACCCCTGTGGCTATACTTGCCTCCATCATTATTTCTGCACTTCCAGGACTTATTGACATCAACGAAGCTTACCATATGTGGAAGGTTGACAAATTCGACTTTCTTGCTTGCATTGGTGCTTTCCTCGGCGTCTTGTTTAAATCAGTAGAGACTGGCCTTCTTGTTGCCGTAATAATCTCGTTTGCAAAGATACTGATACAAACAATTCGACCTGGAATAGAAGTTCTGGGGAGAGTTCCAAGAACAGAGTCTTTTTGTGATGTTAGTCAGTTTCCCATGGCCATAAGTACTCCTGGAATCTCGGTTTTTCGCATAAGCTCTGGTTCACTATGCTTCGCAAATGCTAACTTCGTCAGAGAAAGAATACTGGAATGGGTCGCAAAAGAAGATAAGATTGCACAAGCGAGGGTGCAAGCAGTGGTCCTGGACATGACCAACCTGACGAATGTGGATACTTCTGGAATTATTGCACTGGAGGAACTGCACAAGAGGTTGCAATCCCGAGACATAGAATTAGCTGTGGTGAACCCAGGGAAGCAAGTCATTCACAAGCTTAAAGTGGCGCAATTCGTGGATAAAATCGGACAGCAAAGGGTTTTTCTTACCGTTGGAGATGCTGTTGACGCGTGTGCTTCTGCTAAATTTGTGGGCCCTTGA 1956 0.4468 MREQSHLHLEDTGQAERSQWILNSPSPPPLWTKLLNLKEAILLRGNSLFSSSNNKVFQRQAASFFLNLFPILSWIRDYKASTFKDDLLAGLTLASLCIPQSIGYATLARLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLLSQVEDPVANPDAYRNLAFTVTFFAGIFQASFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDAISVLESVYKSLRQQLTSGSADKWYPLNFVVGCSFLIFLLISRVVGRRNRKLFWLPAISPLISVILSTLLVYLTKADKHGVNIIKRVKGGLNPSSAHLLQFHGQHFGQTAKIGLISAIIALTESIAVGRSFASIRGYNLDGNKEMLAMGFSNIAGSLTSCYVATGSFSRTAVNVSAGCRTAISNIVMAVTVFVSLELLTRLLYYTPVAILASIIISALPGLIDINEAYHMWKVDKFDFLACIGAFLGVLFKSVETGLLVAVIISFAKILIQTIRPGIEVLGRVPRTESFCDVSQFPMAISTPGISVFRISSGSLCFANANFVRERILEWVAKEDKIAQARVQAVVLDMTNLTNVDTSGIIALEELHKRLQSRDIELAVVNPGKQVIHKLKVAQFVDKIGQQRVFLTVGDAVDACASAKFVGP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00370 651 SUPERFAMILY SpoIIaa-like 531 643 IPR036513 -
Accr3g00370 651 CDD STAS_SulP_like_sulfate_transporter 524 636 - -
Accr3g00370 651 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Accr3g00370 651 Gene3D STAS domain 503 646 IPR036513 -
Accr3g00370 651 ProSiteProfiles STAS domain profile. 540 643 IPR002645 -
Accr3g00370 651 NCBIfam sulfate permease 70 639 IPR001902 GO:0016020|GO:0055085
Accr3g00370 651 PANTHER SULFATE TRANSPORTER 49 643 IPR001902 GO:0016020|GO:0055085
Accr3g00370 651 Pfam STAS domain 527 639 IPR002645 -
Accr3g00370 651 Pfam Sulfate permease family 83 471 IPR011547 GO:0016020
Accr3g00370 651 FunFam Sulfate transporter 31 503 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00370 Accr-Chr3 4079268 4082261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00370 14 647 Inorganic Solute Cotransporters AT5G10180 63.594 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00370 K17469 - gmx:100798723 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00370 3 4079268 4082261 Accr4g00437 4 4195173 4198512 CCT