Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00355 ATGCATCACATACCTCGTTTTTTTGGTCACAGAAAGCAAAGCAAGGGCATGGACCCGAATAAAGGCCGAAGAAAACTCCGGCTCGATCGCCGCAATGCCGTCAAGTACGTTGAGTATGATGCTGGGTCGTCTTCGTCGTCTCTAGACAACTCGTGTGGATCCCTCTACACTCGATCAACGGAGTTCAGTGATCGAACCAGCTTCCGAATTGCCGGAGCTGAGGGGGAGGTTGACCGCATATGCAGAGATTTGGGGTTTTCCGGACCTGAAGACTTCTCCATTCCGGCGGCGGCGTGGGAGGCTATGAAAAGTAGATCTTCTCCGGCTAGTACACCAAGTTCGAAGATGAACGAGTTAGAAGGTCAGGAGAACGAGAAATTACATGAAGAGAGTCCTGGAGCGGGTGACTTAGGTAACAAATTCGAAGAAAGGGTTACCTTAAGATATTCAGCTGAGTCAACTCAAGATGAGCCTGCTGAGACTAGTGGGTGCTGCATTGCTGGCGGTAGTGTCTGTGGAACCAGTGTCGGAGTAGGTATTAAAGGAATCCGTCCACCGATGCTAAAGCCGCCGCCTGGAGTTAGGCATCCAGTTGTTGATAACACTTGCTCTACTTGGGACATTTTGAGGGATTTAGCTCCGCAAGCTGCAAGACAAGCTTTAGGAAATTACGGGGAGTTGAACTCGTCCGATCATAACCAAGTAATACAAAGGGAAACAGAGCAAGGAGAAGTAAATGAAGAGGAGAAAGAAGAACATGTAGTTGAAGGCAAGGTAAGTCCGAGTGGAGAAGAGGATGTTAATGCGACAAGGATTGCGGAGATCGTTGCTCAGCTTTCGGCATCGTGTTCGTTTACTACGTCAAACGAAGATGATTCTTCTAGCACTTTCACGGATCCTCCATCGAATAATATATCTCCCAACGTAAGATTCAGGCGCAGAATTACGAACTGGGAAAAGGGTGAGCTCCTGGGACGTGGTTCGTTTGGGTCAGTCTATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAGGAAGTTTCACTACTTGATCAAGATGAACAGGGAAGGCAAAGTGTCTATTGCCTGGAGCAGGAAATTGCTCTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGCACAGAAATGGATCAATCAAAGCTGTATATTTTTCTCGAGCTTGTGACAAAAGGTTCCCTTGCAAATCTTTATCGGCGGTACAATCTTCGAGACTCGCAAGTATCTGCCTACACAAGACAGATTTTGCATGGTTTAAAGTATCTTCATGATCGAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTAGATGCAAATGGATCTGTCAAGCTTGCGGATTTTGGATTGGCAAAGGCTACCAAACTGAACGATATCAAGTCGTGCAGGGGGACAGCATTCTGGATGGCACCTGAGGTTGTGAAAGGAAAGAATCAAGGTTATGGACTTTCGGCTGATATATGGAGTCTGGGGTGCACTGTGCTCGAGATGTTAACAGGCCAAATTCCATACTCTCATTTGGAATGTATGCAGGCTTTGTTTAGAATTGGAAAGGGTGAGCGCCCTCTTGTTCCTGACTCTCTTTCAAGAGATGCGCAAGATTTTATCATGCGGTGTCTTCAAGTCAATCCTGATGATCGTCCCACTGCTACTCAGCTTTTAAACCATCAATTTGTCCAAAGGCCACTTTCCACATTCTCTGGCTCGGCATCTCCTTATATACCTGCCAGAAGGGGTTGA 1776 0.4572 MHHIPRFFGHRKQSKGMDPNKGRRKLRLDRRNAVKYVEYDAGSSSSSLDNSCGSLYTRSTEFSDRTSFRIAGAEGEVDRICRDLGFSGPEDFSIPAAAWEAMKSRSSPASTPSSKMNELEGQENEKLHEESPGAGDLGNKFEERVTLRYSAESTQDEPAETSGCCIAGGSVCGTSVGVGIKGIRPPMLKPPPGVRHPVVDNTCSTWDILRDLAPQAARQALGNYGELNSSDHNQVIQRETEQGEVNEEEKEEHVVEGKVSPSGEEDVNATRIAEIVAQLSASCSFTTSNEDDSSSTFTDPPSNNISPNVRFRRRITNWEKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQDEQGRQSVYCLEQEIALLSQFEHENIVQYYGTEMDQSKLYIFLELVTKGSLANLYRRYNLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDIKSCRGTAFWMAPEVVKGKNQGYGLSADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGKGERPLVPDSLSRDAQDFIMRCLQVNPDDRPTATQLLNHQFVQRPLSTFSGSASPYIPARRG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00355 591 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 75 584 - -
Accr3g00355 591 SUPERFAMILY Protein kinase-like (PK-like) 292 577 IPR011009 -
Accr3g00355 591 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g00355 591 Gene3D Transferase(Phosphotransferase) domain 1 315 583 - -
Accr3g00355 591 MobiDBLite consensus disorder prediction 104 118 - -
Accr3g00355 591 MobiDBLite consensus disorder prediction 103 138 - -
Accr3g00355 591 MobiDBLite consensus disorder prediction 238 260 - -
Accr3g00355 591 MobiDBLite consensus disorder prediction 238 265 - -
Accr3g00355 591 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Accr3g00355 591 FunFam Mitogen-activated protein kinase 1, putative, expressed 316 583 - -
Accr3g00355 591 ProSiteProfiles Protein kinase domain profile. 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00355 591 Pfam Protein kinase domain 319 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00355 591 SMART serkin_6 318 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00355 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Accr3g00355 591 MobiDBLite consensus disorder prediction 119 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00355 Accr-Chr3 3861016 3873819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00355 9 575 MAP Kinase Kinase Kinase AT4G08500 48.130 1.26e-168 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr3g00355 Pkinase 8.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00355 K13414 - qsa:O6P43_019713 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00355 3 3861016 3873819 Accr4g00412 4 3945573 3952248 CCT
Accr3g00355 3 3861016 3873819 Accr3g00355 3 3861016 3873819 ECH