Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00336 ATGGAACCTATCTTTTGCTTCTCTCTCATTCTTCTCTTCTTCTCTGGCATATCTGCTGACTACATTTTCTCAGAATCTATCAATCCAAATTTCACTGCTACATATCTTCAATTCATTTACAGTTCTGGTGCCTTCTTGTCATCCCGCAATGGAACATTCGAGGCTGCTATATTCAATCCTGAACATCAACAATCCAGATTCTACTTGTGCGTCATACATGTGCCATCCCGCACCATCATTTGGTCTGCTAATCGTGACGCTCCCATCTCAAATTCTGATACGATGAATCTGACTACCAAAGGGATCACTATTTTTTATCACGATAGAAACGTCAAATGGTCAACCCCACCATTGAAATCACCAGTATCCGCACTACAACTCACTGAAACGGGCAACCTCGTCTTACTTGATAGTTCCAATGTTTCCTTGTGGGAGAGTTTCCAGCACCCGACAGACACAATTGTCATGGGACAACGCTTGCCTGTTGGGACATGGCTGTCAAGTGCAATATCAGTCTCTGACCTTTCAACAGGAGACTACAACTTGAGTATAACTTCATCTGATGCAATACTTCAGTGGCATGGACAGACATACTGGAAGTTGTCGATGGTCTCAAACGCCTTTCAGGATTCAAGTCATATGGTGGAATACATGGCAATAAACAGAACAGCCCTTGATCTCTTTGGGAGTAATGGAACAGTAACAGTGTTTAGGGTGGTCTTACCCATGGCTCATTTCAGAATTGCCAAATTGGCTGTTAATGGTCAGTTTACCGTCCAAAGCTTTTCCGGTACTGGCTGGGTCGTCCAGGATTTTGTGGGGCCAGATAATGGTTGTGAGACTCCATTTTTTTGTGGCAGATTAGGATTATGTACTCATGGTGCTGCGTCCTCTTCACCTTCCTGTTATTGTCCTCCAAACTTCCATGCAGGCTCAAGTGATGTTCCGGGTTGTGTGCCTAGCAGTGGTTCTTATTCTTCGCCATCTGCCTGTAATTCATCTGTTTATGATGGTGCATCGAATTCTTCATCTGTTTCATATTTGGAACTCGGGGGTGGTATCCAGTACTTTGGCAATACCTACTCTAACACCGTAACATATGTGGTGAACTTAACTATTTGTCAAGATATCTGTTCAAGGAATTGTTCGTGCTTGGGATTCTTCTATGAAAATTCGTCTGGGTCCTGCTATATTCTTGAAAACCAGTTGGGTTCTATTATGTCAAGTAGTGGAGGTGCAAATAACTCGTTGGGCTACATAAAAGTTATAGGTGCATTGGCTTCTGCTATTGATCCACGCACTTCTGAAGATGATAGCCTTCCTGTGGCTGTTCTGGTGATAATACCTATTGCTGGATTCATTATTGCTATGGCTCTTGGTTTCCTCTGGCTTAGAAGATATAGAACCTCAAGGGCAAAAGAGAGAGAATTAGGCAACTTCAAATCACGTTCTTCTGACGACTTGGAGACCTTCTATATTCCAGGTTTACCAAAAAGGTTTGATTATGAAGAACTTGTGGAGGCCACTGATAGTTTCAAGACTCTCATCGGTTCAGGTGGATTTGGTGCGGTGTTCAAGGGCCAACTTCCTGATAAGACCCTGGTGGCGGTGAAGAAAATAGTGAGTCTGGGAAATCAAGGGAAAAAAGATTTCTGCACTGAGATTGCAATTATTGGGAATATTCACCACGTTAATTTAGTGAAACTGAAAGGCTTTTGTGCTGAAGGAAGACAACGTCTGCTGATTTATGAGTTCATGAATCGTGGCTCCCTGGATCGCAGCCTCTTTGGTGGTGGACCAGCCTTAGAATGGCAAGAAAGGTTCGATATAGCACTCGGAACAGCACGTGGACTTGCCTATCTGCACGGCGGGTGTGAGCAAAAGATCATTCACTGTGATATCAAACCAGAGAATATTCTCCTGCATGATCACTTTCAGGCTAAGATATCTGATTTTGGACTCTCAAAACTCCTCAGCCCCGAACAGTCTGGTTTATTCACAACAATGAGAGGCACGCGAGGCTATCTAGCTCCAGAGTGGCTTACCAACTCTGCAATCACAGAGAAGACTGACGTTTATAGTTTTGGAATGGTGCTGCTTGAGCTAGTCAGCGGGAGGAAAAACTGTTCAGTGGGGTCACAAAGCCCGAGCAAGGACGAGAGTATGAGTAGCAATTCAGGGACGTCATCAGGGACAGGATTGGTTTATTTTCCACTGTATGCCTTAGAGATGCACGAGCAAGGAAGGCACCTTGAATTGGCAGACCCAAGGCTAGGAGGGCGGGTTTCAAATGAGGAGGTGGAGAAACTAGTGCGTGTAGCCTTGTGCTGTGTTCATGAAGAACCGTCGCTTAGGCCAAATATGGCCACTGTTGTAGGCATGTTGGAAGGTGGGACTCCATTGGCCCAGCCAAGAATTGAATCTTTGAATTTCTTGCGTTTTTATGGGCGTAGGTTTTCAGAGGCTTCCATGATAGCCGAGGAAAGCACCGCGTCCCAACAAGCACGGAAACCTTCAGCTACAAGTACTGGTGGTTCTCAAACCGCTTTTTCTTACATTTCTTCACATGACATCTCAGGGCCTAGATAA 2589 0.4461 MEPIFCFSLILLFFSGISADYIFSESINPNFTATYLQFIYSSGAFLSSRNGTFEAAIFNPEHQQSRFYLCVIHVPSRTIIWSANRDAPISNSDTMNLTTKGITIFYHDRNVKWSTPPLKSPVSALQLTETGNLVLLDSSNVSLWESFQHPTDTIVMGQRLPVGTWLSSAISVSDLSTGDYNLSITSSDAILQWHGQTYWKLSMVSNAFQDSSHMVEYMAINRTALDLFGSNGTVTVFRVVLPMAHFRIAKLAVNGQFTVQSFSGTGWVVQDFVGPDNGCETPFFCGRLGLCTHGAASSSPSCYCPPNFHAGSSDVPGCVPSSGSYSSPSACNSSVYDGASNSSSVSYLELGGGIQYFGNTYSNTVTYVVNLTICQDICSRNCSCLGFFYENSSGSCYILENQLGSIMSSSGGANNSLGYIKVIGALASAIDPRTSEDDSLPVAVLVIIPIAGFIIAMALGFLWLRRYRTSRAKERELGNFKSRSSDDLETFYIPGLPKRFDYEELVEATDSFKTLIGSGGFGAVFKGQLPDKTLVAVKKIVSLGNQGKKDFCTEIAIIGNIHHVNLVKLKGFCAEGRQRLLIYEFMNRGSLDRSLFGGGPALEWQERFDIALGTARGLAYLHGGCEQKIIHCDIKPENILLHDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCSVGSQSPSKDESMSSNSGTSSGTGLVYFPLYALEMHEQGRHLELADPRLGGRVSNEEVEKLVRVALCCVHEEPSLRPNMATVVGMLEGGTPLAQPRIESLNFLRFYGRRFSEASMIAEESTASQQARKPSATSTGGSQTAFSYISSHDISGPR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00336 862 PIRSF SRK 1 846 IPR024171 GO:0004674
Accr3g00336 862 FunFam serine/threonine-protein kinase PBS1-like 479 585 - -
Accr3g00336 862 ProSiteProfiles Bulb-type lectin domain profile. 31 148 IPR001480 -
Accr3g00336 862 Gene3D Phosphorylase Kinase; domain 1 496 585 - -
Accr3g00336 862 Gene3D - 37 148 IPR036426 -
Accr3g00336 862 ProSitePatterns Protein kinases ATP-binding region signature. 516 539 IPR017441 GO:0005524
Accr3g00336 862 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 43 148 - -
Accr3g00336 862 MobiDBLite consensus disorder prediction 826 855 - -
Accr3g00336 862 SUPERFAMILY Protein kinase-like (PK-like) 486 795 IPR011009 -
Accr3g00336 862 CDD STKc_IRAK 516 797 - -
Accr3g00336 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Accr3g00336 862 Gene3D Transferase(Phosphotransferase) domain 1 586 803 - -
Accr3g00336 862 SMART ntp_6 342 422 IPR003609 -
Accr3g00336 862 CDD PAN_AP_plant 340 422 - -
Accr3g00336 862 SMART serkin_6 510 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00336 862 Pfam Protein kinase domain 513 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00336 862 CDD B_lectin 41 150 IPR001480 -
Accr3g00336 862 Pfam D-mannose binding lectin 78 161 IPR001480 -
Accr3g00336 862 MobiDBLite consensus disorder prediction 826 862 - -
Accr3g00336 862 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 801 - -
Accr3g00336 862 SMART blect_4 37 150 IPR001480 -
Accr3g00336 862 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 201 IPR036426 -
Accr3g00336 862 FunFam Serine/threonine-protein kinase 586 803 - -
Accr3g00336 862 ProSiteProfiles PAN/Apple domain profile. 331 424 IPR003609 -
Accr3g00336 862 ProSiteProfiles Protein kinase domain profile. 510 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00336 Accr-Chr3 3638089 3640677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00336 450 804 Receptor kinase-like Gene Family AT5G20050 40.533 1.34e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr3g00336 Pkinase 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00336 - - qsa:O6P43_015213 1139.79