Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00333 ATGCCCATGCCTATTGACATGTATGCTATACCTGAGCTCCACTTTTCCGACTACACCGCCGCTACTTCTTCCGACGAGGACTGTAACTACTGGAACCACTGGTCACCCGTCGTCAACTGGGACTCCCTCACTTGTGGGCCCGGCCATGAAGGCTTCCACGACCTCATGGAAACCATGATGGAAGACGCAGCCGGTGTAATGAGCCCCCAAACAGATCCCAGCGTGGAAGAGGAAGGATGTAGCAACTCCGCCACCACGACCGAGGTGACCACGGCTGACGATGAAGTAGACGACAGTTTGGAGGATTTCAATAAGGGCCTGAGACTGGTGCACCTTCTGATGGCTGCCGCCGAGGCTCTCACCGGAGCCAACAACAGCCGTGATCTGGTTATGGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGCCGACCCACGGAACCAACATGGAGCGGCTAGCAGCATATTTTACGGATGCCTTGAGGGTCATAGTAGAAGGGGCCCACAGTACTAAGCATTTGAATTGGATCGCCAACAGTGGCGGCAACGACAACCGTCACCAGATCGACATGCTCACCGCCTTCCAGCTCCTTCAGGACATGTCACCGCACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTGGAGTCGGTGGCCCACGACAGGCGGGTCCACATCGTCGACTATGACATCATGGAGGGGACCCAATGGGCCTCCTTGATGCAGGCCCTGGCCTCCCGCAAGGATGGCCCACATATCAGGATCACGGCCATCTCCAGGACGGGAAGTGCTCGGAGATCAATCGCCACCGTCCAAGAGACTGGCCGTCGTTTGACTGCCTTCGCCGCTTCCATTGGCCAACCCTTCTCGTTTCACCAATGCAGGCTCGACTCCGACGAGACCTTCCGACCGTCCGCCTTGAAACTGGCTCGCGGGGAGGCGGTGGTCTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGGGCAGGGGAATCGGTGGAGTCGTTTCTCCGGGGGGCGGCGGAGTTGAAGGCAAGGGTGGTGACGTTGGTGGAGGAAGACGCTGGGCCGACGGGGAAAGAAGTGGGGTTTGTGGGGAGGTTCATGGACAGGCTGCACCATTATTCGGCGGTGTATGATTCGATGGAGGCGGGGTTTCCGATGCAGGGTCGGGCGAGGGCGTTGGTGGAGCGGGTATTCTTGGGGCCCCGAATAGCAGCGTCGTTGGCCCGCATATACAGAATGGGGGAATCCGAGAGTGGGTCGTGGGGGGAGTGGTTGGTTGAGGAAGGGTTCAGGGGAGTGGACATAAGCTTCGCCAATCACTGTCAAGCGAAGCTGTTGCTGGGTTTATTCAACGACGGATATGGATTGGAGGAGATGGGCTGTAAAAATAAGTTGGTTTTGAGTTGGAAATCAAGGCGCTTGCTTTCCGCTTCTGTTTGGACCCCTTTTGTAAATTCATAA 1473 0.5723 MPMPIDMYAIPELHFSDYTAATSSDEDCNYWNHWSPVVNWDSLTCGPGHEGFHDLMETMMEDAAGVMSPQTDPSVEEEGCSNSATTTEVTTADDEVDDSLEDFNKGLRLVHLLMAAAEALTGANNSRDLVMVILVRLKELVSPTHGTNMERLAAYFTDALRVIVEGAHSTKHLNWIANSGGNDNRHQIDMLTAFQLLQDMSPHVKFAHFTANQAILESVAHDRRVHIVDYDIMEGTQWASLMQALASRKDGPHIRITAISRTGSARRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSALKLARGEAVVFNCMLHLPHQSYRAGESVESFLRGAAELKARVVTLVEEDAGPTGKEVGFVGRFMDRLHHYSAVYDSMEAGFPMQGRARALVERVFLGPRIAASLARIYRMGESESGSWGEWLVEEGFRGVDISFANHCQAKLLLGLFNDGYGLEEMGCKNKLVLSWKSRRLLSASVWTPFVNS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00333 490 MobiDBLite consensus disorder prediction 67 88 - -
Accr3g00333 490 Pfam GRAS domain family 109 485 IPR005202 -
Accr3g00333 490 ProSiteProfiles GRAS family profile. 100 485 IPR005202 -
Accr3g00333 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 83 481 IPR005202 -
Accr3g00333 490 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00333 Accr-Chr3 3578946 3580418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00333 71 486 GRAS Transcription Factor Family AT3G54220 34.571 2.34e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g00333 GRAS 1.9e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00333 - - gmx:100787926 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00333 3 3578946 3580418 Accr3g00333 3 3578946 3580418 ECH