Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00332 ATGGCCATGCCCATGCCTATTGACATGTATGCTATACCTGAGCTCCACTTTTCCGACTACACCGCCGCTACTTCTTCCGACGAGGACTGTAACTACTGGAACCACTGGTCACCCGTCGTCAACTGGGACTCCCTCACTTGTGGGCCCGGCCATGAAGGCTTCCACGACCTCATGGAAACCATGATGGAAGACGCAGCCGGTGTAATGAGCCCCCAAACAGATCCCAGCGTGGAAGAGGAAGGATGTAGCAACTCCGCCACCACGACCGAGGTGACCACGGCTGACGATGAAGTAGACGACAGTTTGGAGGATTTCAATAAGGGCCTGAGACTGGTGCACCTTCTGATGGCTGCCGCCGAGGCTCTCACCGGAGCCAACAACAGCCGTGATCTGGTTATGGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGCCGACCCACGGAACCAACATGGAGCGGCTAGCAGCATATTTTACGGATGCCTTGAGGGTCATAGTAGAAGGGGCCCACAGTACTAAGCATTTGAATTGGATCGCCAACAGTGGCGGCAACGACAACCGTCACCAGATCGACATGCTCACCGCCTTCCAGCTCCTTCAGGACATGTCACCGCACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTGGAGTCGGTGGCCCACGACAGGCGGGTCCACATCGTCGACTATGACATCATGGAGGGGACCCAATGGGCCTCCTTGATGCAGGCCCTGGCCTCCCGCAAGGATGGCCCACATATCAGGATCACGGCCATCTCCAGGACGGGAAGTGCTCGGAGATCAATCGCCACCGTCCAAGAGACTGGCCGTCGTTTGACTGCCTTCGCCGCTTCCATTGGCCAACCCTTCTCGTTTCACCAATGCAGGCTCGACTCCGACGAGACCTTCCGACCGTCCGCCTTGAAACTGGCTCGCGGGGAGGCGGTGGTCTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGGGCAGGGGAATCGGTGGAGTCGTTTCTCCGGGGGGCGGCGGAGTTGAAGGCAAGGGTGGTGACGTTGGTGGAGGAAGACGCTGGGCCGACGGGGAAAGAAGTGGGGTTTGTGGGGAGGTTCATGGACAGGCTGCACCATTATTCGGCGGTGTATGATTCGATGGAGGCGGGGTTTCCGATGCAGGGTCGGGCGAGGGCGTTGGTGGAGCGGGTATTCTTGGGGCCCCGAATAGCAGCGTCGTTGGCCCGCATATACAGAATGGGGGAATCCGAGAGTGGGTCGTGGGGGGAGTGGTTGGTTGAGGAAGGGTTCAGGGGAGTGGACATAAGCTTCGCCAATCACTGTCAAGCGAAGCTGTTGCTGGGTTTATTCAACGACGGATATGGATTGGAGGAGATGGGCTGTAAAAATAAGTTGGTTTTGAGTTGGAAATCAAGGCGCTTGCTTTCCGCTTCTGTTTGGACCCCTTTTGTAAATTCATAA 1479 0.5727 MAMPMPIDMYAIPELHFSDYTAATSSDEDCNYWNHWSPVVNWDSLTCGPGHEGFHDLMETMMEDAAGVMSPQTDPSVEEEGCSNSATTTEVTTADDEVDDSLEDFNKGLRLVHLLMAAAEALTGANNSRDLVMVILVRLKELVSPTHGTNMERLAAYFTDALRVIVEGAHSTKHLNWIANSGGNDNRHQIDMLTAFQLLQDMSPHVKFAHFTANQAILESVAHDRRVHIVDYDIMEGTQWASLMQALASRKDGPHIRITAISRTGSARRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSALKLARGEAVVFNCMLHLPHQSYRAGESVESFLRGAAELKARVVTLVEEDAGPTGKEVGFVGRFMDRLHHYSAVYDSMEAGFPMQGRARALVERVFLGPRIAASLARIYRMGESESGSWGEWLVEEGFRGVDISFANHCQAKLLLGLFNDGYGLEEMGCKNKLVLSWKSRRLLSASVWTPFVNS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00332 492 ProSiteProfiles GRAS family profile. 102 487 IPR005202 -
Accr3g00332 492 MobiDBLite consensus disorder prediction 76 92 - -
Accr3g00332 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 85 483 IPR005202 -
Accr3g00332 492 MobiDBLite consensus disorder prediction 69 94 - -
Accr3g00332 492 Pfam GRAS domain family 111 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00332 Accr-Chr3 3578946 3580424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00332 73 488 GRAS Transcription Factor Family AT3G54220 34.571 1.98e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g00332 GRAS 2e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00332 - - gmx:100787926 617.076