Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00327 ATGGTGAAGAGAGAAGAGAAGATCCAGGAGAAGTATAGGGGAAAACAGAGTGTATCAGAAGGGAAGAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGATCATGGGTATCAGAGGTCAGAGCACCTAACCAGAAAACAAGAATATGGCTGGGCTCTCATTCAACTCCTGAGGCTGCAGCCAGAGCCTATGATGTTGCACTTCTCTGCCTCAAAGGCTCCTCTGCAAATCTCAATTTCCCTTCTTCTTCTCACTTCAATATTCCTCAAGACACTATCTTGTCCCCTAAATCAATCCAAAGATTAGCTGCAGCCGCTGCTGCTAATACTTGTTTTGATAATGCAACCACCCCACTTTCTCCTCCTCCTCCATCATCATCAGTCTCATCTTCTTCATCAATGGTTTCGTCTCCGTCTGATCTTGTTGATGATGATGATGCTTCATTAATCTCATCATTTGAGGCCTTCTCTGGATGTTATCACCCCAGTGAGCCAGTGCCTGCCATGGAACCTTGGTACGGCCTTGAAGGGCTACAGTCTCCTAAGTATGTTGATCAAATGCTGAGTGTTGCTAATTCTTTTGACTTTTATTCACACCATCTGCTCGATGATCTCTACGAAGAAAGCAACATCAGTTTGTGGAGCTTCTGCTGA 654 0.4495 MVKREEKIQEKYRGKQSVSEGKKKYKGVRMRSWGSWVSEVRAPNQKTRIWLGSHSTPEAAARAYDVALLCLKGSSANLNFPSSSHFNIPQDTILSPKSIQRLAAAAAANTCFDNATTPLSPPPPSSSVSSSSSMVSSPSDLVDDDDASLISSFEAFSGCYHPSEPVPAMEPWYGLEGLQSPKYVDQMLSVANSFDFYSHHLLDDLYEESNISLWSFC 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00327 217 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Accr3g00327 217 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Accr3g00327 217 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Accr3g00327 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 146 - -
Accr3g00327 217 MobiDBLite consensus disorder prediction 114 141 - -
Accr3g00327 217 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Accr3g00327 217 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Accr3g00327 217 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g00327 217 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Accr3g00327 217 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Accr3g00327 217 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Accr3g00327 217 FunFam ethylene-responsive transcription factor ERF014-like 23 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00327 Accr-Chr3 3533365 3534018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00327 25 216 AP2-EREBP Transcription Factor Family AT1G21910 47.236 5.16e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr3g00327 AP2 1.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00327 - - gmx:100813615 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00327 3 3533365 3534018 Accr3g00327 3 3533365 3534018 ECH