Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00326 ATGGCACCCGTTACTCAACTTCCCTGCGACTGCAACGGCATTTGCAGGGCTTGCAAGGTGAAGCCGGCAGAGGCGAAGAAGCTGACGTGTAAAACATGCGCCACCCAATGGCACGTTGACTGTCTTTCTTGCCGTCCGGAGACAATGGAGGAGGTGGTTGAATGGGAATGCCCGGACTGTTCCTCCCTACACCGTGACCTTCCAGTGGCCCACGAGAAGACGTTGCCAGAGGGAGCTGGGGATCTCATAGCAGCCATTCGAGCTATAGAGGCCGATGGGTCTCTCTCAGATATGGAAAAGGCCAAAAAACGCCAATGGCTTCTCAGTGGGAAGGCCGTGTTGGAAGAAGGGGAGGAGAAAAGGCGAGAAGGAGATGGAAGCAACATTTTGGACATCCTCAATGGAACGCTTAAGTGCTCATTCTGCCTCGAATTACTGGAGAGGCCTGTCACAACTCCATGCGGGCACAATTTTTGTCTCAAGTGCTTCAAGAAATGGGTGGGCCAAGGCAAAAAGACGTGCGCAAAGTGTCGTGCGGTGATCCCTAGCGACGTGGCAAGCGGAATTCGAATTAATTCCGCCGTCGTAAATGCCATTCGCGCAGCGAAGGCGTCTAAAGCTAGCAGTACTGCCGGAGAAACTTGGAGAGTGTACCAGTTTGTACACAACCAAGACAGGCCGGACAGAGCATACACCACAGAGAGGGCCAAAAGGAAAGGCAAGGCAAATGCAGCGAGCGGAAGGATATTCGTAACAGTGCCTCAGGATCATTTTGGTCCAATCACAGCTGAGAATGATCCATTGCGGAATCAAGGTGTACTTGTGGGCGAATGCTGGGCTGACAGATTTGAATGCCGGCAATGGGGGGCCCATTTCCCTCATATCAGCGGTATTGCCGGCCAGTCCAAACGTGGTGCTCAATCCGTTGTTCTTTCCGGCGGTTATATCGACGATGAGGATCATGGAGAGTGGTTCATTTACACCGGAAGCGGCGGTAGAGATCTAAAAGGCAACAAACGAACCAGTAAAGAGCAGTCTTTCGATCAAACGTTTGTGAAGTCGAACTTAGCGCTTAAAGTGAGTTGTCTAAAGGGGTACCCTGTTAGAGTATTAAGATCGCATAAAGATAAACATTCCCCGTATGCCCCCCGGGAAGGTATAAGATACGACGGAATTTACAGAATTGAAAAATGTTGGGCGAAACAAGGAATGCAGGGCTTCAAGGTTTGCCGTTATTTGTTTGTTAGATGTGAAAATGAACCCGCTCCTTGGACGAGCGATGATCACGGTGATCGCCCAAGACGATTACCAGAACTTCAAGAGTTGGAGGAGGCAGTAACTGTAATTGAAAGGCAAGAAGATCCATCCTGGGGTTATGATGAGCAAGATACTTGTTGGAGATGGATGAAGCCGCCCCCTCCAAGCAATTGGCGAGTTAGAAGAATTGATTCAGAAGAGACTGAAAGATCATGGAAAATAATTAAGAAATCCAAAAACATATCAATTAGCGAAAGCTTGTTGAGAGGATTGAAATGTCTTATCTGTGGGCAAGTTATGGCTTCTCCTGTAACCACGCCATGCGGCCATAACTTTTGCAAGACATGTTTAGAAGGAACATTTGCGGGCGTGCCTTTCCTGAGAGAGAGAACCAGAGGCGGAAGGTCACTTCGCTCGCAAAAGAATGCGCGAATATGTCCCGCTTGCCCTACTAATATATCTGATTTTCTTCAAAATGTTCAGATTAATAGGGAGTTGATGACTTTAATTAACTCGCTAAAGGAAGAGGCTGAACAGAAAAGAAATTCTGAGGACTTGACCGGTGAGAATTCAAGCGGAGACAAGATGGAGGAGGTCGAAACTGTTGTTGAGGAAGATGGAGAAGATACTGATTCAGATGAGGAAGAGTGA 1908 0.4827 MAPVTQLPCDCNGICRACKVKPAEAKKLTCKTCATQWHVDCLSCRPETMEEVVEWECPDCSSLHRDLPVAHEKTLPEGAGDLIAAIRAIEADGSLSDMEKAKKRQWLLSGKAVLEEGEEKRREGDGSNILDILNGTLKCSFCLELLERPVTTPCGHNFCLKCFKKWVGQGKKTCAKCRAVIPSDVASGIRINSAVVNAIRAAKASKASSTAGETWRVYQFVHNQDRPDRAYTTERAKRKGKANAASGRIFVTVPQDHFGPITAENDPLRNQGVLVGECWADRFECRQWGAHFPHISGIAGQSKRGAQSVVLSGGYIDDEDHGEWFIYTGSGGRDLKGNKRTSKEQSFDQTFVKSNLALKVSCLKGYPVRVLRSHKDKHSPYAPREGIRYDGIYRIEKCWAKQGMQGFKVCRYLFVRCENEPAPWTSDDHGDRPRRLPELQELEEAVTVIERQEDPSWGYDEQDTCWRWMKPPPPSNWRVRRIDSEETERSWKIIKKSKNISISESLLRGLKCLICGQVMASPVTTPCGHNFCKTCLEGTFAGVPFLRERTRGGRSLRSQKNARICPACPTNISDFLQNVQINRELMTLINSLKEEAEQKRNSEDLTGENSSGDKMEEVETVVEEDGEDTDSDEEE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00326 635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 207 IPR013083 -
Accr3g00326 635 ProSiteProfiles YDG domain profile. 268 416 IPR003105 -
Accr3g00326 635 Gene3D - 239 437 IPR036987 -
Accr3g00326 635 SMART ring_2 512 568 IPR001841 -
Accr3g00326 635 SMART ring_2 139 177 IPR001841 -
Accr3g00326 635 SUPERFAMILY FYVE/PHD zinc finger 7 67 IPR011011 -
Accr3g00326 635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 62 IPR013083 -
Accr3g00326 635 ProSitePatterns Zinc finger RING-type signature. 527 536 IPR017907 -
Accr3g00326 635 Coils Coil 582 602 - -
Accr3g00326 635 CDD RING-HC_ORTHRUS_rpt1 137 182 IPR047498 -
Accr3g00326 635 MobiDBLite consensus disorder prediction 594 635 - -
Accr3g00326 635 SUPERFAMILY RING/U-box 506 595 - -
Accr3g00326 635 ProSitePatterns Zinc finger PHD-type signature. 9 60 IPR019786 -
Accr3g00326 635 MobiDBLite consensus disorder prediction 618 635 - -
Accr3g00326 635 Pfam Zinc finger, C3HC4 type (RING finger) 139 177 IPR018957 GO:0046872
Accr3g00326 635 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 239 434 - -
Accr3g00326 635 SMART G9a_1 263 420 IPR003105 -
Accr3g00326 635 SUPERFAMILY RING/U-box 131 200 - -
Accr3g00326 635 MobiDBLite consensus disorder prediction 594 617 - -
Accr3g00326 635 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 5 603 IPR045134 -
Accr3g00326 635 ProSiteProfiles Zinc finger RING-type profile. 512 568 IPR001841 -
Accr3g00326 635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 499 622 IPR013083 -
Accr3g00326 635 Pfam RING-type zinc-finger 512 566 IPR027370 -
Accr3g00326 635 Pfam SAD/SRA domain 271 419 IPR003105 -
Accr3g00326 635 ProSiteProfiles Zinc finger RING-type profile. 139 178 IPR001841 -
Accr3g00326 635 SUPERFAMILY PUA domain-like 243 437 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00326 Accr-Chr3 3525214 3528169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00326 1 598 C2H2 Transcription Factor Family AT5G39550 57.686 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00326 K10638 - qsa:O6P43_017375 830.476