Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00298 ATGGATTCTCTGTGTGCTTGTATGCAGACGCAGACGGTGGCGACTTCAACCGAGAATTCCTTAACGCTGACAATGAAGATGGAAGACAGATCTAATGTTGTGGAGGAGAGTGTTAAGCTTCAACAAGATCTGCAACATTTCCATGTCTTAGCCGTCGACGACAGCCTCATCGACCGGAAGCTTCTCGAGAAGCTCCTTCAGGTCTCTTCTTGCAAAGTGACGAGTGTGGACTCCGGCGACAAGGCTTTGAAATATCTTGGTCTTCTCGATGATCTTGATAGTGCTTCTCCAACTTCTTCAGAATCATCATCTTCTTCTCCCCAGTCACCCCAACAAGAGGAAATGAAAGTGAATTTGATCATGACGGACTACTGCATGCCTGGGATGAGTGGCTATGATTTGCTTAAACGAGTCAAGGGATCCTCTTGGAAACACGTACCAGTGGTGATCATGTCATCAGAGAATGTACCATCCAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAGGAGTTTCTACTGAAGCCACTGAAGTTATCAGACCTGAAGAAGCTTCAGCCGTACCTTGTGAAATCCAAATCCCAAGAGAACCATAACAATAAGAATGGTAATAATGAGGATGATAATAATTCATCAAGCGAACAAGAATCTGAGAACAGTGATGCAGCAACCGACAATGACTGCAATCCCAACAGTAATAACAACACTTGTATTACCAAAAGGAAGGCCATGTCCACTCAGCCTTCTGACAGATCCAGACCCAAATTCAAAGGCTTAGCGGTCGTGTAA 786 0.4504 MDSLCACMQTQTVATSTENSLTLTMKMEDRSNVVEESVKLQQDLQHFHVLAVDDSLIDRKLLEKLLQVSSCKVTSVDSGDKALKYLGLLDDLDSASPTSSESSSSSPQSPQQEEMKVNLIMTDYCMPGMSGYDLLKRVKGSSWKHVPVVIMSSENVPSRISMCLEGGAEEFLLKPLKLSDLKKLQPYLVKSKSQENHNNKNGNNEDDNNSSSEQESENSDAATDNDCNPNSNNNTCITKRKAMSTQPSDRSRPKFKGLAVV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00298 261 SMART REC_2 47 185 IPR001789 GO:0000160
Accr3g00298 261 ProSiteProfiles Response regulatory domain profile. 48 189 IPR001789 GO:0000160
Accr3g00298 261 CDD REC_typeA_ARR 49 184 - -
Accr3g00298 261 MobiDBLite consensus disorder prediction 192 261 - -
Accr3g00298 261 Gene3D - 48 223 - -
Accr3g00298 261 Pfam Response regulator receiver domain 113 183 IPR001789 GO:0000160
Accr3g00298 261 PANTHER TWO-COMPONENT RESPONSE REGULATOR 47 225 IPR045279 GO:0009736
Accr3g00298 261 MobiDBLite consensus disorder prediction 192 251 - -
Accr3g00298 261 SUPERFAMILY CheY-like 46 188 IPR011006 -
Accr3g00298 261 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00298 Accr-Chr3 3276266 3278519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00298 46 259 Response Regulator Gene Family AT3G57040 48.729 1.40e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr3g00298 Response_reg 2.5e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00298 K14492 - gmx:100786187 259.225