Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00292 ATGTCAAAGTCTACATCTCCAGAACCGCCGCGGTCCATTTATTCTTCATCTTGGACTAGGGAAACTAAAGCGGCCGAAGAAACGGATGATCCGGAATCTACAATGACTACAGTGGCTAATTTTGTTGAGCAACTGCATGCCAACTTGTCATCACCAGTTGAGAAGGAATTCATCACAGCACGTCTGCTAGGCATTGCCAGGACAAGAAAGGATGCTAGAACACTTATTGGTTCTCATGCCCAAGCAATGCCATTGTTCATAAGCATTCTCAGAAATGGAACGCCTGTGGCAAAAGTTAATGTTGCTGCCACTCTGAGTGTCCTGTGCAAAGACGAGGATTTGAGGTTGAAAGTACTTCTTGGTGGTTGTATTCCACCTTTACTGTCACTTTTGAAGTCTGAAACCAGAGAGGCAAGGAAGGCTGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGCCTTTCAGAAGATCATGTTGGCATGAAAATTTTTGTCACAGAGGGTGTAGTTCCAATTTTATGGGATCAACTAAATCCAAAGAACAAGCAAGACAAAGTTGTGGAGGGTTTCATTACCGGAGCATTGAGAAATCTGTGTGGCGACAAAGACAGATACTGGAAAGCAACATTGGAAGCAGGGAGTGTGGATATTACTGTAGGGCTCTTGTCATCAAACAATGCTGTTGCTCAGTCAAACGCAGCTTCTCTGCTAGCACGACTGGTGCTGGCTTACAGTGATAGCATCCCCAAAGTAATAGAATCTGGTGCAGTCAATGCTTTACTTCGGCTTGTTGGTCAGAAAAATGATATATCTGTCCGAGCAAGTGCTGCTGATGCTCTAGAGGCTCTTTCATCAAAGTCAACTGAGGCAAAGAAAGCCATTGTCAGTGCAGCTGGTGTTCCAATTCTCATTGGGGCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGGAAATGGCCAGGATCTGCAGGAGCATGCAACTCAAGCTTTGGCAAATATTTGTGGTGGCATGTCTTCTTTAATACTATATCTCGGAGAACTCTCCCATTCTCCTCGCCTAGCTGCACCAGTTGGTGATATAATTGGAGCTCTTGCTTATACACTAATGGTGTTTGAGGACAAACATGATGTTGATGGGGAGCCTTTTGATGCAACTCAAATTGAGGATATTCTTGTGACACTATTAAAGCCTCGAGATAACAAGTTGATTCAAGAGAGAGTATTAGAGGCCATGGCTAGTCTATATGGAAACATCTATCTCTCGAAATCGCTTGAGCATGCAGATTCAAAAAAGTTTCTTATTGGACTCATTACTATGGCTGCTGCTGATGTGCAGGACTATCTCATACTCTCCTTGACAAGCTTGTGCTGTGATAGGGTAGGAATATGGGAAGCCATAAACAGAAGAGAAGGCATCCAGTTACTTATCTCAATGTTGGGACTATCCAGTGAGCAGCATCAAGAGTATGCAGTTCAGTTGCTATCAATTTTAATTGACCAGATTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGAATTCCTCAATTGGTTCAGTTATTAGAGACAGGATCACAGAAGGCTAGAGAGGAAGCTGCTCATATTCTGTGGAACCTGTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGTGCAGGGGCCATACCAGCATTCTTATGGCTTTTAAAGATTGGTGGACCAAGAGGACAAGAAGCTTCTGCCATGGCACTCATTAAGCTTGTGCGAATAGCTGATTCTGCTACCATTAATCAATTATTGGCATTGCTTCTTGGGGACACGCCGGGTTCAAAGGTCCATATAATTCGAGTCTTAGGTCATGCACTTACTATGGCTTCACAGATGGACCTCCTGCAGATGGGTTCTGCGGCTAATAAGGGGTTGAAATCTCTAGTTCAGGTTCTCAACTTATCAGACGAGGAAAGCCAGGAACATGCGGCTTCTGTCCTAGCTGATTTATTCAGTGCAAGACAAGACATTTGTGATAGCCTCCTTGCTACTGATGAAATTGTGCTTCCTTGCATGAAGCTTTTGACCAGCAAAAATCAAGTTGTTGCAACTCAGTCAGCTCGAGCATTGGCTGCTCTGTCTCATCCAACACACAGCAGACCTGCCAATAAAATGCCTTATATTGGAGAGGAGGATGTCAAACCGCTAATTAAATTGGCTAAAACGTCCTCTATCGATGCTGCTGAAACTGCAGTTGCTGCACTGGCCAATCTTCTCTTTGATGCCTCTATTGCTGCTGAAGCTTTGGCGGGAGATCTTGTTTCATCTTTAAATAGAGTTCTGGCAGAAGGAACTTTGGAAGGTAAACAAAATGTGTCACGAGCACTTCATCAGTTACTGAAGCATTTTCCTGTTGGTGATGTTCTCAAGGGAGATGCTCAGTACCGTTTCACTGTTCTTGCACTTGTTGGTTCCTTGAGTGCTATGAATATGGATGGAACTGATGCTGCTGATGCTTTAGAAGTAGTTGCACTGCTTGCCCGGGCAAAACAGGGCGACAATTTCACTTGCACTCTGTGGTCTGCATTTGCAGAAACACCATCCAATTTAGAACCTCTTGTACACTGCCTGGCTGAGGGGCCTCCCCAAGTGCAGGAAAAGGCAATTGAAATTCTATCTAGACTTTGCGGTGATCAATTAGTTGTTCTTGGGGATTTGTTGGCTGCTATGTCTAGATCCATTAGTTCATTAGCTGATAGAATGATGAACTCCTCCAGTTTAGAAGTCAAAGTTGGAGGGGCTTCCTTACTTATTTGTGCTGCAAAGGAGCATAAGGAGCAGTCAATGGATGTACTTGACACTTCTGGGCATCTAAAACCATTAATATCTACTTTAGTAGATATGCTGAAGCTGGACTCTAACTGTTCATTAGAGGTTGAAGGACAAACTTCTAGAAATTTTATGGTGAAGAGTGCATTTCAGGAAGTTGATCTTGATACTCCTGATCTAGCCAAAGTCTCGGGTGTTACTGTTGCCTTGTGGTTACTCTCAATTATTGCTTCTTCCAGTGTAAAGAGCAAACTCGCTATTATGGAAGCTGGTGGACTTGAGTCTCTCTCTGAAAAGCTTGCACACCATACTTCCAATCCACAGGCAGAATTTGAGGATACTGAAGGAATATGGATAAGTGCCTTGCTCCTGGCCATTTTGTTTCAAGATGGAAATGTTGTTCTATCTCCAGTAACAATGCACATTTTACCTTCTCTCACTCATTTACTGCGATCTGAAGAAGTGGCATATAAATATTTTTCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTGATAAGGGAATAGCTCTTGCTGTTGCAAACTCTGGTGCCATTGCTGGATTGATTTCTATGATTGGCTACATGGAGTCAGATATACTAAAAATTATTCCTTCATCGGATGAATTTTCACTGGTGCGAAATCCTGATCAAGTAGTTTTGAATCACCTTTTTAAAATTGAAGATATAAGATTGGGGTCTACTGCACGAAAATCTATACCTCTCTTGGTGGATCTATTGAAACCAATTCCAGAAAGGCCTAGTGCTCCACCAGTTGCTGTTAAACTCTTGACATGCATTGCAGATGGAAGTGATGCAAACAAAATAATCATGGCTGAAGCAGGCGCTTTGGAAGCTTTGACAAAATACCTGTCTTTGAGCCCTCAAGACTCAACCGAGGCCAGTATTTCTGAGTTATTAAGAATACTATTTCGCAATTCTGACCTTGTTAAGCATGAAGCATCAGCAAGTTCCCTGAACCAACTCATTGCTGTTTTGCGTCTTGGATCAAGAAAGGCTAGATATAGTGCAGCAAGAGCACTTTATGAACTTTTTGATGCCGAGGGTATTAGAAACTCGGAATTAGCTAAACAGGCCATTCAGCCTCTGGTTGACATGCTTAATACAACATCAGGTAGCGAGCAGGAGGCTGCTCTAATTGCATTAGTCAAATTAGCATCTGGAAATTCTTCAAAAGCATCTTTTTTCGCTGATCTAGAAGGGAACCCACTTCAGAGTTTATACCAGATATTGTCTTCCGCTTCATCCTTGGAACTAAAGAGCAATGCTGCACAACTTTGCTTTGTCCTTTTTGCTAGCAAAAAGCTTAGAGCTGACCCCCTTGCCTCAGGATTCATAGAACCTCTTGTTTCATTGGTACAGTCTGATTCTGGTCCGGCAATAGAAGCTGGGATTTTTGCTTTTGAGAGATTATTGGAAGATGAACAACATGCGGAGCTTGCACTAGTCCACAATTTTGTGGATCTCCTTGTTAGTTTGGTTGTGGGCTCCAACTATCAGCTGATTGAGGCTACCATGTCTACTCTCATCAAATTGGGAAAAGATAGGACGCCATGCAAATTAGACATGGTTAAAGCTGGCATTCTTGATAATTGTCTGAAGTTACTTGAATTTGCACCTAGCTCATTGTGCTCCACAATTGCTGAACTATTCCGCATTTTGACAAATAGCAGTGCAATTGCGAGAAGTTCAGCAGCTGCAGAAATTGTAGAACCCCTTTTTCAAGTTTTGCTCCGTCTAGATTTTGACTTGTGGGGACAGCATAGTGCCTTACAAGCTCTTGTAAATATATTGGAGAAGCCACAAAGTCTTTCAACCTTAAAAGTAACTCCTAGTCAAGTTATTGAGCCCTTAATCTCATTCCTGGAATCACCATCCCAAGCCATTCAGCAGCTTGGCACTGAACTGTTGTCTCATCTTCTTGCACAGGAACATTTCCAGCAAGATATTAAAACAAAGAATGCTGTCGTTCCTCTTGTTCAACTTGCAGGGATTGGAATACTGAACTTACAGCAAACAGCAATCAAAGCATTGGAGAAAATCTCCAAAAGATGGCCAAAAGCAGTTGCTGATGCGGGAGGAATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTGGTTCTTTCTAATGTACTATGTTCCAATGCTGATTATTATTTTAAAGTTCCTGTGGTAGTTCTTGTAAAACTGTTGCACTCAACGGTTGAGAGTACCATTAGCATGGCTCTTAATGGACTAATGATTCATGAAAGAAGTGATGCTTCAAGCGCTGAACAGATGATGGAAGCTGAAGCTATAGATGTTCTGTTAGACCTTTTAAGATCTCATCATTGTGAAGAAGCATCTGGCAGATTACTTGAAGCTCTATCCAACAATGTGAAAATAAGAGAGATGAAGGCATCTAAGTATGCAATAGCACCGTTATCTCAATATCTGTTAGATCCGCAGACCAGATCACTGTCTACCAAGCTTCTTGTTGCTTTAGCTTTGGGAAATATTTCCCAGCATGAAGGACATGCTAGAGCTGGTGGTTCTGTTTCTGCTTGTCGTGCATTGGTAAGTTTACTTGAGGATCAGCCAACTGAAGAAATGGTGATGGTTGCTATTTGTGCGTTGCAAAATTTTGTCATGAACAGCAGGACTAATAGGCGAGCTGTTGCAGAAGCTGGTGGTATACTGGTGATTCAGGAATTACTGCTGTCTACAAATCCTGATGTTGCAGGACAAGCAGCATTGCTGATCCAATTTTTATTTTCTACTCACACGCTACAAGAATATGTGTCAAATGAGCTGATCAGATCTCTGACAGCTGCACTGGAAAGAGAGTTGTGGTCAGCTGCCACAATCAATGAAGAGGTTTTGAAAACTCTGCATGTCATATTCACAAACTTCCCTAAGCTCCACGTGTCTGAAGCAGCAACTCTTTGCATTCCTCATTTGATAGGGGCCCTCAAATCTGGTAGTGAAGTGACTCAAGACTCTGTGCTAGACACCTTGTGCTTGCTAAGACATTCTTGGTCAACCATGCCAATAGATATATCGAAATCTCAGGCTATGATCGCTGCTGAGGCCATTCCCATCCTGCAAATGCTCATGAAAACATCTCCCCCAAATTTCCATGAGAGAGCAGATAGTCTTCTGGATTGCTTACCAGGTTGTTTGACTGTCACCGTTAAGCGCGGAAACAACCTCAAGCAAGCTATGGGAAGTACAAATGCGTATTGCCAGTTAACACTAGGCAATGGTCCTCCTAAACTAACCAAGGTTGTCAGTCACAGTATTTCGCCAGAATGGGAAGAAGGATTCACGTGGGCATTTGATGTACCTCCAAAGGGCCAGATGTTGTACATCGTATGCAAAAGCAAGAATACTTTTGGCAAGGCAACTCTTGGAAGAGTTACTATACAAATTGATAAAGTGGTAAACGAGGGAGTGTACAGTGGAATATTCAGTCTTAATCACGACAGAAACAAAGATGGTTCTTCCCGAACTCTTGAAATTGAGATTATATGGTCCAATAGGATCTCTGATGACGACCTTTGA 6402 0.4258 MSKSTSPEPPRSIYSSSWTRETKAAEETDDPESTMTTVANFVEQLHANLSSPVEKEFITARLLGIARTRKDARTLIGSHAQAMPLFISILRNGTPVAKVNVAATLSVLCKDEDLRLKVLLGGCIPPLLSLLKSETREARKAAAEAIYEVSSGGLSEDHVGMKIFVTEGVVPILWDQLNPKNKQDKVVEGFITGALRNLCGDKDRYWKATLEAGSVDITVGLLSSNNAVAQSNAASLLARLVLAYSDSIPKVIESGAVNALLRLVGQKNDISVRASAADALEALSSKSTEAKKAIVSAAGVPILIGAIVAPSKECMQGNGQDLQEHATQALANICGGMSSLILYLGELSHSPRLAAPVGDIIGALAYTLMVFEDKHDVDGEPFDATQIEDILVTLLKPRDNKLIQERVLEAMASLYGNIYLSKSLEHADSKKFLIGLITMAAADVQDYLILSLTSLCCDRVGIWEAINRREGIQLLISMLGLSSEQHQEYAVQLLSILIDQIDDSKWAITAAGGIPQLVQLLETGSQKAREEAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKIGGPRGQEASAMALIKLVRIADSATINQLLALLLGDTPGSKVHIIRVLGHALTMASQMDLLQMGSAANKGLKSLVQVLNLSDEESQEHAASVLADLFSARQDICDSLLATDEIVLPCMKLLTSKNQVVATQSARALAALSHPTHSRPANKMPYIGEEDVKPLIKLAKTSSIDAAETAVAALANLLFDASIAAEALAGDLVSSLNRVLAEGTLEGKQNVSRALHQLLKHFPVGDVLKGDAQYRFTVLALVGSLSAMNMDGTDAADALEVVALLARAKQGDNFTCTLWSAFAETPSNLEPLVHCLAEGPPQVQEKAIEILSRLCGDQLVVLGDLLAAMSRSISSLADRMMNSSSLEVKVGGASLLICAAKEHKEQSMDVLDTSGHLKPLISTLVDMLKLDSNCSLEVEGQTSRNFMVKSAFQEVDLDTPDLAKVSGVTVALWLLSIIASSSVKSKLAIMEAGGLESLSEKLAHHTSNPQAEFEDTEGIWISALLLAILFQDGNVVLSPVTMHILPSLTHLLRSEEVAYKYFSAQAMASLVCNGDKGIALAVANSGAIAGLISMIGYMESDILKIIPSSDEFSLVRNPDQVVLNHLFKIEDIRLGSTARKSIPLLVDLLKPIPERPSAPPVAVKLLTCIADGSDANKIIMAEAGALEALTKYLSLSPQDSTEASISELLRILFRNSDLVKHEASASSLNQLIAVLRLGSRKARYSAARALYELFDAEGIRNSELAKQAIQPLVDMLNTTSGSEQEAALIALVKLASGNSSKASFFADLEGNPLQSLYQILSSASSLELKSNAAQLCFVLFASKKLRADPLASGFIEPLVSLVQSDSGPAIEAGIFAFERLLEDEQHAELALVHNFVDLLVSLVVGSNYQLIEATMSTLIKLGKDRTPCKLDMVKAGILDNCLKLLEFAPSSLCSTIAELFRILTNSSAIARSSAAAEIVEPLFQVLLRLDFDLWGQHSALQALVNILEKPQSLSTLKVTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDIKTKNAVVPLVQLAGIGILNLQQTAIKALEKISKRWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLCSNADYYFKVPVVVLVKLLHSTVESTISMALNGLMIHERSDASSAEQMMEAEAIDVLLDLLRSHHCEEASGRLLEALSNNVKIREMKASKYAIAPLSQYLLDPQTRSLSTKLLVALALGNISQHEGHARAGGSVSACRALVSLLEDQPTEEMVMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSTNPDVAGQAALLIQFLFSTHTLQEYVSNELIRSLTAALERELWSAATINEEVLKTLHVIFTNFPKLHVSEAATLCIPHLIGALKSGSEVTQDSVLDTLCLLRHSWSTMPIDISKSQAMIAAEAIPILQMLMKTSPPNFHERADSLLDCLPGCLTVTVKRGNNLKQAMGSTNAYCQLTLGNGPPKLTKVVSHSISPEWEEGFTWAFDVPPKGQMLYIVCKSKNTFGKATLGRVTIQIDKVVNEGVYSGIFSLNHDRNKDGSSRTLEIEIIWSNRISDDDL 2133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00292 2133 SMART C2_3c 2006 2102 IPR000008 -
Accr3g00292 2133 SUPERFAMILY ARM repeat 468 798 IPR016024 -
Accr3g00292 2133 Pfam C2 domain 2006 2105 IPR000008 -
Accr3g00292 2133 SUPERFAMILY ARM repeat 474 1626 IPR016024 -
Accr3g00292 2133 SUPERFAMILY ARM repeat 1001 1126 IPR016024 -
Accr3g00292 2133 Gene3D - 370 672 IPR011989 -
Accr3g00292 2133 Gene3D - 834 1160 IPR011989 -
Accr3g00292 2133 SMART arm_5 1541 1582 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 664 705 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 1832 1872 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 1583 1623 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 201 242 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 617 662 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 244 285 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 1456 1496 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 457 499 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 1286 1327 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 1204 1245 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 710 750 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 543 583 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 1744 1788 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 287 335 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 501 541 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 111 151 IPR000225 GO:0005515
Accr3g00292 2133 SMART arm_5 157 200 IPR000225 GO:0005515
Accr3g00292 2133 Pfam Armadillo/beta-catenin-like repeat 505 540 IPR000225 GO:0005515
Accr3g00292 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1800 1843 IPR000225 GO:0005515
Accr3g00292 2133 Gene3D C2 domain 2006 2131 IPR035892 -
Accr3g00292 2133 MobiDBLite consensus disorder prediction 1 33 - -
Accr3g00292 2133 Gene3D - 19 190 IPR011989 -
Accr3g00292 2133 CDD C2 2007 2097 - -
Accr3g00292 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 512 554 IPR000225 GO:0005515
Accr3g00292 2133 Gene3D - 191 369 IPR011989 -
Accr3g00292 2133 Gene3D - 1608 2005 IPR011989 -
Accr3g00292 2133 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 14 2127 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Accr3g00292 2133 ProSiteProfiles C2 domain profile. 1986 2103 IPR000008 -
Accr3g00292 2133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2003 2109 IPR035892 -
Accr3g00292 2133 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Accr3g00292 2133 SUPERFAMILY ARM repeat 71 307 IPR016024 -
Accr3g00292 2133 SMART E-Z type HEAT repeats 1271 1310 IPR004155 -
Accr3g00292 2133 SMART E-Z type HEAT repeats 270 301 IPR004155 -
Accr3g00292 2133 SMART E-Z type HEAT repeats 1773 1812 IPR004155 -
Accr3g00292 2133 Gene3D - 1345 1604 IPR011989 -
Accr3g00292 2133 MobiDBLite consensus disorder prediction 1 21 - -
Accr3g00292 2133 Gene3D - 673 833 IPR011989 -
Accr3g00292 2133 SUPERFAMILY ARM repeat 1609 2003 IPR016024 -
Accr3g00292 2133 Gene3D - 1161 1344 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00292 Accr-Chr3 3196400 3204898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00292 472 713 U-box Gene Family AT2G23140 30.400 3.68e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00292 - - gmx:100796864 3299.22