Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00291 ATGGCATCTGCAGATCTACAGCTACCTCCCGGCTTCCGATTCCATCCGACGGATGAGGAGCTGGTGATGCACTATCTCTGTCGTAAATGTGCATCGCAGCAAATAGCTGTTCCGATCATTGCAGAAATCGATCTTTACAAGTATGATCCTTGGGACCTTCCTGGCCTGGCTTTGTATGGTGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGCAAATATCCGAACGGTTCGAGGCCGAACCGGTCCGCGGGGACCGGCTACTGGAAAGCAACCGGAGCGGATAAGCCCATCGGCCATCCCAAACCGGTTGGGATCAAGAAAGCTTTGGTGTTTTATGCCGGAAAAGCGCCGAAAGGCGAGAAATCAAATTGGATCATGCATGAGTACCGTCTCGCAGATGTGGATCGTTCCGCTCGCAAAAAGAATAGCTTAAGGCTTGATGACTGGGTGCTTTGCCGTATCTACAACAAGAAAGGTGCCATCGAGAAGCAAACGAGTCCTCGTGATGTGAGCCAGATAACGGCTGAGTCATCGGAAATCGAGGACAAGAAGCCGGTGCATTTGTCCCGGGGCGTCGCACTTCCTCCTCCGCCGCCACCGGCTCAAGCGCCGCCGGTGGTCACCGATTACATGTATTTTGACAATTCGGATTCAATCCCAAAGCTGCACACGGATTCGAGCTGTTCGGAGCAAGTGGTGTCGCCGGAGTTCGCTAGTGAGGTGCAGAGCGAGCCCAAGTGGAATGAATGGGAGAAAAACCTTGATTTTCCGTATAATTACATAGATGCCACTCTGGGCAATAATGGCTTCGGATCGCAGTTTCAGGGCGGCGGTCAGATGTCGCCGTTACAGGATATGTTCATGTACATGCAGAAGCCCTTCTGA 888 0.5236 MASADLQLPPGFRFHPTDEELVMHYLCRKCASQQIAVPIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKSNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQTSPRDVSQITAESSEIEDKKPVHLSRGVALPPPPPPAQAPPVVTDYMYFDNSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNLDFPYNYIDATLGNNGFGSQFQGGGQMSPLQDMFMYMQKPF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00291 295 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Accr3g00291 295 PANTHER NAC TRANSCRIPTION FACTOR 56 8 215 - -
Accr3g00291 295 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Accr3g00291 295 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Accr3g00291 295 MobiDBLite consensus disorder prediction 167 186 - -
Accr3g00291 295 FunFam NAC transcription factor 17 162 - -
Accr3g00291 295 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00291 Accr-Chr3 3171266 3172762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00291 6 295 NAC Transcription Factor Family AT1G01720 74.503 1.45e-154 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr3g00291 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00291 - - mnt:21396546 486.493