Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00286 ATGTCAAACCAGAATCGTCGTTCGTCGTTTTCTTCCTCCACAACGTCGTCGTTGGCGAAACGGCATGCGTCGTCATCGTCGGAGAATGTGGGGAAGCCTACGTCTCTGCCTCCTCAAATGGCTAAGAAGCGAGCGCCTCTCGCTAACGTGACCAATCTAAAGAATGCGTCTCACACTGCCTCGCGAAACCCTCTGCCATCATCGACTCTGGTACCTGGCGCAACTAAAATCGCCAAGACAAACAAGGAACCCACCCCGTCAAATGTTAAACCAAGTGCAGTTGTTTTCCCCAAGTCTAGTTCATTCACACACAAAAATGAAGCTGCTCCTACAGTCACAGCTTTCACTGTTCCAGTTTCTACCAATTTGGATGCAAAATCAAGTACCATTGATTTTCCTAAGGTTACTTCTGCTTCACAAAAGTCTGAAGCTGCTCCTGCAGTTTCCAATTCCACTGTCCCCCTTACAAGCATCATGGATGTTTCTCCTAGTAAATCAGATGGGATGTCTGTCTCAATGGATGAGACTATGTCTACTTGCGATTCATTCAACAGTCCTGAAGTTGAATACGTGGACAATAACGATGTTTCAGCTGTTGACTCTATTGGTAGAAAGACACTGAACATTCTGAACATCTCTGATAATACAGATAGAACAACAGGCAACATTTGCAGCAGAGACATACTTGTTGAGTTGGAGAGAAAAGATAAAATTGCCAATATCGATAGTAATTACATGGATCCACAGCTCTGTGCGACCTTTGCTTGTGACATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCGCAGATTACATGGATAGAGTTCAAAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTAGAGGTGGCTGAAGAGTACCGGCTTGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTGTCAGGGAATGCCATGAACAGACAAAAATTACAATTACTTGGAGTTGCCTGCATGATGATTTCCTCTAAATACGAGGAGATTTGCGCGCCTCAGGTGGAAGAATTTTGTTATATCACTGATAACACATACTTCAAGGATGAGGTTTTGCAAATGGAATCTGCTGTGTTGAATTTTCTCAAGTTCGAAATGACAGCCCCAACAATTAAATGTTTCTTGAGACGATTCGTTCGCGCAGCGCAAGGAGTGAATGAGGTCCCATCATTGCAATTAGAGTGCTTGGCCAACTACATAGCCGAATTGTCTCTCTTGGAGTATAGCATGCTTTGTTATGCCCCCTCACTGATAGCTGGTTCTGCAATTTTCCTCGCCAAATACATACTCTTCCCTTCAACCAAGCCCTGGAATTCGACATTGCAACATTATACACTTTACCAGCCGTCTGATTTGTGCGACTGCGTCAGGGATCTGCATCGTCTGTGTTGCAACGCCCTCACTTCTAATTTGCCTGCAATCCGAGAGAAATACAGTCAACACAAGTACAAATATGTGGCCAAGAAGTACATTCGGTCATCAATACCTCCAGAATTTTTCCAGAACTGA 1560 0.4404 MSNQNRRSSFSSSTTSSLAKRHASSSSENVGKPTSLPPQMAKKRAPLANVTNLKNASHTASRNPLPSSTLVPGATKIAKTNKEPTPSNVKPSAVVFPKSSSFTHKNEAAPTVTAFTVPVSTNLDAKSSTIDFPKVTSASQKSEAAPAVSNSTVPLTSIMDVSPSKSDGMSVSMDETMSTCDSFNSPEVEYVDNNDVSAVDSIGRKTLNILNISDNTDRTTGNICSRDILVELERKDKIANIDSNYMDPQLCATFACDIYKHLRASEAKKRPSADYMDRVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMISSKYEEICAPQVEEFCYITDNTYFKDEVLQMESAVLNFLKFEMTAPTIKCFLRRFVRAAQGVNEVPSLQLECLANYIAELSLLEYSMLCYAPSLIAGSAIFLAKYILFPSTKPWNSTLQHYTLYQPSDLCDCVRDLHRLCCNALTSNLPAIREKYSQHKYKYVAKKYIRSSIPPEFFQN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00286 519 ProSitePatterns Cyclins signature. 288 319 IPR006671 -
Accr3g00286 519 SMART Cyclin_C_2 386 514 IPR004367 -
Accr3g00286 519 FunFam Cyclin A1 373 505 - -
Accr3g00286 519 SUPERFAMILY Cyclin-like 247 383 IPR036915 -
Accr3g00286 519 MobiDBLite consensus disorder prediction 1 34 - -
Accr3g00286 519 SUPERFAMILY Cyclin-like 386 509 IPR036915 -
Accr3g00286 519 PANTHER CYCLINS 189 497 IPR039361 -
Accr3g00286 519 Gene3D - 271 384 - -
Accr3g00286 519 FunFam Mitotic cyclin 6 271 371 - -
Accr3g00286 519 Pfam Cyclin, C-terminal domain 386 505 IPR004367 -
Accr3g00286 519 CDD CYCLIN_AtCycA_like_rpt1 247 382 - -
Accr3g00286 519 MobiDBLite consensus disorder prediction 158 178 - -
Accr3g00286 519 Pfam Cyclin, N-terminal domain 257 383 IPR006671 -
Accr3g00286 519 MobiDBLite consensus disorder prediction 1 48 - -
Accr3g00286 519 SMART cyclin_7 293 377 IPR013763 -
Accr3g00286 519 SMART cyclin_7 390 478 IPR013763 -
Accr3g00286 519 CDD CYCLIN_AtCycA-like_rpt2 386 500 - -
Accr3g00286 519 Gene3D - 257 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00286 Accr-Chr3 3101415 3104718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00286 1 519 Core Cell Cycle Gene Families AT1G44110 62.141 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00286 K06627 - qsu:112028095 717.227