Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00277 ATGAAAATGCTGAAAGCGGGCCTAGCCGGAGAAGGCAGCGACGGGAAATCAGGTGGCCGGACGGTGCTGGTGGGAGTGAAGTTGGATTCTCCCAGCAGGGAGTTGCTCACATGGGCTTTGGTTAAGGTTGCTCAGCCTGGTGATATTGTGGTTGCTCTTCATGTTCTTGGAGACGATGAAATTGTGAACCGAGACGGGAAGGCGTCGCTTCTTTCGCTGGTCACGGCATTTGACTCTGTTCTTGCTGTTTTCGAAGGCTTTTGCAATTTGAAACAGGTGGATCTCAAACTCAAGATCTGCAGAGGCTCGTCAGTCCGGAAAATCTTAGTTCGAGAAGCAAACGCCTATTCTGCAACTCATATTTTAGTGGGAACTGCTCAAGGCCTTCATAAATTGCGAACGTCTACCTCCGTAGCTAAGTACTGCGCTAAGAAGCTATCCAAGGACTGCTGGGTTGTTGCTGTCAATAATGGAAAAGTTGTATTCAAGAGAGAAGGCTCATCAGCAGCCCCTGTTAACTTGCGAGGAATTGATGGTCGTGCCAGAAATGGTTTGCTTGCTTCGATTCGCCGGACATTCAGTTCTAGTTCCAAAGTACTAAATGATGACAACACGGGAATACTTGACAAGGGCACTAGCAAAACTTCGGATAATAGCTTAGCCAAGGCCTTTGTTGATTCTACAGAAACCGTTCAGAAACGAAGCTGCTCGCTTTGTGGTCCAGCATATGCATTGCCAGATTCTGCTTGCAACCAAGCTGCAGAAGAGTCTTCTGGTGGTAGCGGCAAAGAATATTCTATGTCTATAGTGCTTGCAGAGACGACTAAGTCAGCATCAAGTGCTAGCGTTCTTCCTGCCAGAAAATCGCCTGAACTAAAACCTGGTTGGCCTCTACTACACAGGACAATTTCTTCAGGCCGGCAATCTCCTGTCGGGTCATTGGTGCGCCAGATCTCGGTGGTTCAGTGGGCAATGCAGTTGCCGAGTAGAAACTTTTGGCATGCTGGGGATCATGTTCACAGACCAGCCAGTTCTGTTCCAGATCATCATCAATCTTTGGCTTTAGATAGCGAGAGTGGTGCTATTGTTCCATTAAATGCTCAAATAGGGATATCCTCTTCTCCTGACTATAATTCAAGGAAAATTCCTAAAGAATTGGAAGGTCTTCCTGAGAAATACTCATCAACCTGCAGATTGTTTCAGTACCAAGAACTTTTTCTGGCTACGTCAAATTTCTCGCCTGAAAATTTGATCGGGGAAGGAGGAAGTAGTCAGGTTTATAGAGGCTATCTTCCTGATGGCAAGGAACTAGCTGTGAAGATCTTAAAGCCCTCTGATGATGTTTTAAAGGAGTTTCTTTTGGAAATAGAAATTATCACTCTCTTGCACCACAAAAACATTATTTCTCTCCTGGGATTCTGCATTGAGGATGGCAATCTTCTTTTGGTGTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGATTCTTCATGGGAGCAAGAAAAATGCACTTGTGTTTGGTTGGACCGAGAGGTATAAGGTGGCAGTTGGTGTAGCTGAGGCTCTAGATTATCTGCATAATAGAGATGCTCAACGTGTGATTCACAGGGACGTAAAGTCATCAAATGTATTATTGTCTGAGGATTTTGAACCCCAGCTATCTGATTTCGGGCTTGCTAAATGGGCATCAGCGTCATCATCTCATATAACTTGCACAGACGTTGCTGGGACCTTTGGCTACTTGGCTCCAGAGTATTTCATGTATGGCAAAGTAAATGCTAAGATTGATGTTTACGCATTTGGAGTCGTGCTCCTTGAGCTTCTCACTGGAAGAAAGCCCATAAGTGGTGATTATCCTAAAGGTCAAGAGAGCCTCGTCATGTGGGCAACTCCAATTCTGAATAGTGGAAAAGTTGCACGATTATTAGATCCAAGTCTGGGTAGTAACTACGATCAGGACCAGATGGAAAGGATGGTCTTGGCAGCCTCGCTTTGCATCAGACGTGCTCCAAGAGCTAGGCCTCAAATGAGCCTTATTACAAAGCTCCTTCAAGGTGATGGTGATGTAATCAGGTGGGCAAGGTTAGAAGCGGACGCTTCTAAGGCGATAGAAACGAACGATGATGAAGGTTGCCCAACTTCCAATTTACAGTCACATCTCAATCTAGCATTCCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTGTTGAGCAAAATGTGTCGTTAGAGGACTACTTGAAAGGCAGGTGGAGCCGCTCATCAAGCTTTGATTGA 2277 0.4541 MKMLKAGLAGEGSDGKSGGRTVLVGVKLDSPSRELLTWALVKVAQPGDIVVALHVLGDDEIVNRDGKASLLSLVTAFDSVLAVFEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHILVGTAQGLHKLRTSTSVAKYCAKKLSKDCWVVAVNNGKVVFKREGSSAAPVNLRGIDGRARNGLLASIRRTFSSSSKVLNDDNTGILDKGTSKTSDNSLAKAFVDSTETVQKRSCSLCGPAYALPDSACNQAAEESSGGSGKEYSMSIVLAETTKSASSASVLPARKSPELKPGWPLLHRTISSGRQSPVGSLVRQISVVQWAMQLPSRNFWHAGDHVHRPASSVPDHHQSLALDSESGAIVPLNAQIGISSSPDYNSRKIPKELEGLPEKYSSTCRLFQYQELFLATSNFSPENLIGEGGSSQVYRGYLPDGKELAVKILKPSDDVLKEFLLEIEIITLLHHKNIISLLGFCIEDGNLLLVYDFLSRGSLEEILHGSKKNALVFGWTERYKVAVGVAEALDYLHNRDAQRVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASASSSHITCTDVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLTGRKPISGDYPKGQESLVMWATPILNSGKVARLLDPSLGSNYDQDQMERMVLAASLCIRRAPRARPQMSLITKLLQGDGDVIRWARLEADASKAIETNDDEGCPTSNLQSHLNLAFLDVEDDSLSMCSVEQNVSLEDYLKGRWSRSSSFD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00277 758 CDD USP_Like 21 153 - -
Accr3g00277 758 Gene3D HUPs 19 156 IPR014729 -
Accr3g00277 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Accr3g00277 758 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 153 - -
Accr3g00277 758 PANTHER OS08G0249100 PROTEIN 168 696 IPR046958 -
Accr3g00277 758 ProSiteProfiles Protein kinase domain profile. 412 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00277 758 Gene3D Phosphorylase Kinase; domain 1 378 486 - -
Accr3g00277 758 FunFam Putative receptor-like serine/threonine-protein kinase 487 699 - -
Accr3g00277 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Accr3g00277 758 SMART serkin_6 412 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00277 758 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 381 486 - -
Accr3g00277 758 Pfam Protein kinase domain 415 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00277 758 SUPERFAMILY Protein kinase-like (PK-like) 393 684 IPR011009 -
Accr3g00277 758 Gene3D Transferase(Phosphotransferase) domain 1 487 692 - -
Accr3g00277 758 Pfam Universal stress protein family 20 153 IPR006016 -
Accr3g00277 758 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00277 Accr-Chr3 3004972 3008406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00277 399 679 Trihelix Transcription Factor Family AT1G68690 47.552 1.23e-78 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr3g00277 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00277 - - pcin:129303222 1307.35