Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00276 ATGGATCATCCCTCCCATTCTCATCACCAGCACCAGCATGCAAGGTACGCTCCTCTTCCCCCTAATCACATGCGCCACTCACAGTTCCCCGAAGATCCCCGTTTCCGCCCTCACCACCTTCCTCCGCCGCCGTCGGCACCAACTCTTCCACCCTTACCCCCTCCTCCATCTCTTCCCTATCGAAACGTCCGCACCCCTCCCCCATCTCATCCTCCCCCATATAAACCTCCTCATCAATCTCAATTTTCTTTCAACGCCCCGAACTATGACCACCGTCCAGTTGAAGAGGATCGCTCTGTATCTGCTAGCCACCCTCATGATTTTACGCACTCGCAGAGGGTTTCAAATCGGACGATCATTGAGAATGATCGTCCTCGCCAAAGTCTCCCTGATTTCGACTATCGTAGTACCGATAACCGCATCAGTGGTTGGAACCTACCGAGGGTTTTGTCAGATAATCGGCCGTCGAGGCCTTACCCTCCTATAGACTTTGACCGGGAATTGCATCATGAGCGCCCATTGAATCACAAAATAGCGCCGCCGTATCCGCCAACTGATAGAGTTAGGTTTAATTCAGAGGGCAACTCTAGGGGAAGAGTTGATCACATTGATGGATACGAAGTCAAGACCAGGGAAGAGTTTGCATGGGCTAGAGGTGATGAGAAATACCTTCGCCGCAGGGATTTTGGATCAAATTTTAACGCATCTTCTGGAGAATTCGGAATCATGTCTAGTCAGAGTACATTATCAAGGGATCTTGATTCGAAAAATGGGGATTATGTTCTTTACGGCTTGGAACGGGACAATGAAATATCTAGGGGTACTAGAAGAGATGGGCTTGGTGATAGCAAGAGGTGGGTAAATGATAGGAACGGCTCCAGAGACCCACATAATTCATCTTTTGAACTGGGAAACAACGAGAATGGTGCCGATGGTATTAGGGTAGCGTCCGGGAAGTATTATGGTTCGGAATTGGGTAGATATAATAATAGAGGAAACCGAGAATCTGGTCATGAATTTATTCGTGCTCCAAAGAAGCAAATTCAGAAAAAGAGCGCACTTCTTAGACTTCAAATGGTAAAACCAAATCACAAGAACCGTGAGATTGAACAGTTACCATATACCAATTATGGTGATGACTCAAGCTCTAATACTTTTAGAGGCAAAGATCAATTTGAATATTTAGGTTTTGGGGTCAAAGCCGAAGAGAGAGAAAGAAGTCCTGTTGAGCTTGATATTTCTTTTAAATCAAATTCTCTGGTGGCTAAGGCCATTGTGGCACCTTCAAGTTCTGCAGTTTCTGATGTAGATATTACCTCTGTTTCTGATACAGATTTTGCTTCTGCAGAAAAGGGAAAAAATGGTTTGGCCTCTGACAGCGATTCTCCTGATTTAAAACCTGCCAAACCATCTATGGCTGCTGTAAACTTAGGTGGCTCACCTTGCAAGGCGAATCTCATTCCTAGTTCCAACAAGGAATTTAACTTACAGAAGAAGGTCTCTGATAGTTGTTCTCAGCTTTGTGCCAGTGTAGCTACTAATTGTCATGTAAAAAATGAGGGGGCCCAAACCCCCAAGGGAATTGTTTCTCATGGAATTACCAACCCTTGCTCTGTTAAAACATCTCAAAGGGTTGTTCCAAGGGTTTCCAAGAAGAAAAAAATTGTAAAGAAAGTGGTGAAGAAGGTTACTTCGAATCGTAATTTAAATGTCTCAAGTTCCATGTCATCAAATATGTCTAATGGAACTGTGAAAGCTGATAGCGTTGGTCCTTCATCTACATCTGAATCTGATAAAACTTCTTTAAAGGAGAAAATCACTGCTGTTGACAAGGTGTCCTTGCCAGATAATTTGATGTCCTCCCCAGAGGAAGGACAATTGCTGCCTGATAATAGTAAGGAAGATGTACCATTGCTTAGTCCAGGGTCACATACCAGTTCACAAGAGCATGAGGCTGATGATAACCCTCATATAGGGCAAGTAGATAGAATTGAAAGAAGTGAAAACATTTCTAATTCCTCATTGGGTGCTTTTAGCATTGAAGATGAAAAGAATGATTCTGATTGTCCGAATGTGGATGATTTTGTCCATGGCTTGCATAGTAGTCTAAGTACTGACAAGGCTTCTAAGGTTAAGTCACCAAATGGAATTACATTTTCTGGTATTAGTAACAAGGATGATGTTAATATGCAACTTTGTCAGAATGAAGTGGCCCTATCACCTCAGCAGTATTCACATGTACAATATTTAGATAATCAGTTTCAGGTAGAAGATGATAAGAACAGCAGACTGTCAACATCCGGTGAGAGTGTAATAAACACAGATGTTATAAACACATGTAATTCTGCCAATGTTAGTCTGGATTGCTTGTATTCCAATGATCTTACTGGTAATGCGCAAAAGAACATTACAGTTTCTGACTTTGGAAATGATGGCAAGGTAGATTGCAAAACTAAAGCCCTACCAGTATCTGACAGTGTTATTTTGGAAGAAAACCCAGAGACTTGCTCCTCTGTACCAAACTGTGGAATGTTTAGTCTTTCTAGTTCCTCGGAAACTAGGATTTCAGATGGTCAAGAATGCCCAAGAAATGCAAGAGTACCCATGCATGTTTCTGATAACAGCCCCACTAATTCAGAAGAGAATATTATGGTTCTCCACAGTGTTATTGTCAAAGATTCCGTGAAGGAGGCATCCCCTGTTGATGTCAATGCATCTCCTGAGAATTGTACCACTGAACAGTCTCCAAATGCTAATTTTTCGGTTAGGTTTGCTGAAGGAGATACAAATATGTCTAAAAAAAGAAAAGTTGAGACACATTTAAAATTTTCAAGTTCAGATATTGGGGGCATATCTCCAGACCCTACACATACAGTTAGCCTTGCAAATGTGCATACAACCTTGAGTCTGTTGAAGGACTCAAGTGTGTCAGAAGTTTTAAATCCATATGTTCAAAGCTCAGATATTTGCTTACCATCCATTACAGGTGAGAATACTGTTTTGGATGGGAAAGGGAAGGTTTCAGAGACAGAAGTTTACTTTGGAAATGGAGTCAGTAACAGTGCAGATAGGGCTTCACCATTGTCTAGAATAAATGAAGTCACTACTAGTGACATGAATGTCAATTCATTGCAAGCTGAACTTTCTGATGCAATTGTGGTTGCCACATCTTGTGCACAAGTTCCTATTACTATTAGTGATAAGAAGACACACCAGGAAGAGGGTGCACTTTCAAGCATGGTTAAACCTTCTGCTTCTCTATCCCTGGCTTATCCTGAGAGTAGTGCTAAATTGTACATCAAAAGTTTGTTTGGAGGATCTGTTGAGTCTGTGGATGCAAATACAAATGTTACAAAGTTTGAATACTCCCAATTGCAGCACCCATCCATCAACTTTCATTCACTTGGGGATTTGACTTTTCCAACCAATCAGTTTCCATTGCTGGAAAATGAGCAGAAAGAAAATTCTCTTCCAGTTGTGCCTATAAACAACATTCAGAAGGACATTCGGGTTTCTGGAAATATGGAGATAGAGAAGATTGATATGCAGGATATTGAAAAATGTGAGTCCGGAGAATTTGTAAAAAGATCTCTGAGTGCTGATTTGGAATCCAGTGATCCTCAAACAAAGGATGATTCACCTCTTGAGCATCAATCTCTGGCCGTCCCAGCTGATACTGATGCTGTAACAACTAGTGACTGCAGTACAGTATCAGATATGCTTTCTCCAGGGACCATGCCTGACATGCTTGATAGTAGGACTTCAGATTGTCAAGCAATCCAAAATGAAAGCTTTCATGGAGATGAAGATAATGTGGATAGCAGATCTAAGGTTGAACAGGATTGTGACTTACTGGCTTCTACATCATATTCACAGTATACTACAAAAAAGAATATAAAATTAAGTCCTGCAACCAGACATGACAACTTGATCACAGGGAAGATGATGCCTCAACCTTTGCAATTTGATTCCAAAGTTATGACTCAAGGACTGAATTCTTCTTGTTCAGAGTTAAATTGTGGCAAAAATCACTTGGGTCCTGCCATTCCTTCTACTTTCCAAGGTCAATCCTACTTAAATTTTCCCAAGTCTAAGATATCTGCATATTCAACCCAGGCTTCAAATGTTCGAACATGGCATCGTACAGGTAATAATTCTGGTTCTCTACCAGGAAACAAGCCTTCGGCAGGATCTGTACCTACCAAAAGGTCAATTTCAGGAAAGAAAGGGAACTTTCAAAATACTTCTTACATTCGGAAAGGTAACAACAGTATTGTAAGGAAACATACTTCTGTTTCTGCTTCACCACAATCCTCAGCTAATCAGTCTTCTTTGGGGTTTAATGAATTTCAAAAGAGCACTGGACCTGAAATTATGGTTGAAGTCTCAAATCACGCCAATCTCTTGAAAACAGGATTGACACAGGCTCCTCTGGAGAGGCAAAGAACACCTCCGCTACCTGTTGACACTAAATTACCTGATCATATGGCAACAGCGTGTGAGGAGAATAAATCTTCCCCATTAGTGGAATCCCATTCCAATGCTTTCCGTGATAGTGAACCTGAATCTGAACCTAGAAACTTTTCAGAGCCTTGTAATGCTCCAAACTCTGCTGATGATGCAATTAAGTTGGATAAAACTGTTGAAAATCTAGCTGCTCCATCAAACAACGTGGAAGGCCAAGTTGAAGCACATGATGAGAATGTGTCTTTGAATTCAAAGAGAATAGTCTATGTAAAGCGCAAATCAAATCAGTTGGTTGCAACTTCCAATTCTTGTGAACTTTCTGCTGCTACTGATGACAACGTCCAGATGGCCTCTTCTGATGGGTACTACAAGAGGAGCAAAAATCAGTTAGTTAGGACTACATTTGAAAGTCAAATCAACCAGACAGTTACAATGCCCACTGTAAACTCTGATGGGCACAGGGCCCGTAAGGCTAGCTGCAACAGGAGGTTTGGTAAGAGGCGGTCACTGAAGGTTGTTGGAAGGTCATGTAAACCTTTGAGAGCCTCATTGGTGTGGACACTCTGTGGTGCAAGTTCATCCAAAAAGGACAATGACTCTCTGCATCATCAGAAGGTTCTGCCTTACTTGTTTCCATGGAAAAGAGCAACATATTTAAGGAGTTTCATTTATAGTCCTGCTTTGAGCTCCAATGCCAATTCATTATCTGCAATCAGCAAGAAATTGGTTCTCTCTAGAAAGAGGGACACTGTTTATACTAGGTCAACCCATGGATTTTCCCTTCGGAAATCCAAGGTGCTAGGCCTTGGGGGATATAGTCTAAAATGGTCAAAATCAATTGAGAAGTCTTCAAAGAAAGCCAACGAGGAAGCCACACTTGCGGTTGCTGCTGTAGAGAAGAAAAAGAGGGAAAGGAAAGATGTTGCTAGTATCAGTTCTCGGGCAAAGAGAGAACGTATATTTCGTATTGGGCCTGTTCGTTACAGAATGGACTCTTCAGGGAGGGCACTTCAAAGGATTTCAGATGATGAGTCCCTGGTCTCTGCTTCACTCCGTTCAGGTTTGCATTTGAAAAGTTCATACATACCAAGGAGATTGGTGATTGGAAATGATGAATATGTTCGAATTGGCAATGGCCATCAGCTTATCAGAGACCCAAAGAAGCGAACCCGTTTATTGGCTAATGAAAAAATTAGATGGAGTTTGCACACAGCAAGACAACGATTGGCTCGGAAGCAGAAGTACTGTCAATTCTTTACTAGATTCGGGAAATGTAACAAGGATGACAGGAAGTGTCCCTATATTCATGATCCCTCAAAAATTGCTGTTTGTACTAAGTTTCTGAATGGTTTATGTTCCACTCCCAACTGCAAATTGACTCATAAGATTATTCCCGAGAGAATGCCTGATTGCTCTTATTTTTTGCAAGGTTTATGCACAAACAGAAAATGCCCCTACAGACATGTTAATGTGAACCCCAAAGCATCTGTTTGCGAAGGATTTCTCCGGGGATATTGTGCCGATGGCAATGAGTGTCGGAAGAAGCACACCTATGTCTGTCCTACTTTTGAAGCAACAGGAATCTGCATCCAAGGGACCAAATGCAAACTTCATCACCCCCAAAAACGAGGCAAGGGAAAGAAAAGGAAGAGATCGGTAGATCAGAGGAACTGTAAAAGGAGGAGATACTTTGGTTCGTTAAGGATTGATGTTTCTGAAACTGGGACAATGGCTGTGGCTCCAAGGCAAGGGGAACAGCATAAGAATGACCTTGAAGGAGAACTAGCTGACTATATCAGTCTCGACGTTGACAACGAAGATGTTGCAGAACTAGCCGAACAAGCAAGCGAGCAATCAACATTGTGGGATAGTGAACCTGTAGATATAGCATTGGATGATGAGGATGAACTCATTAGACCTGTTCTGATAATGAACAAGGATATTAGGGCGGAGGCATCTCCTGTCTGA 6435 0.4182 MDHPSHSHHQHQHARYAPLPPNHMRHSQFPEDPRFRPHHLPPPPSAPTLPPLPPPPSLPYRNVRTPPPSHPPPYKPPHQSQFSFNAPNYDHRPVEEDRSVSASHPHDFTHSQRVSNRTIIENDRPRQSLPDFDYRSTDNRISGWNLPRVLSDNRPSRPYPPIDFDRELHHERPLNHKIAPPYPPTDRVRFNSEGNSRGRVDHIDGYEVKTREEFAWARGDEKYLRRRDFGSNFNASSGEFGIMSSQSTLSRDLDSKNGDYVLYGLERDNEISRGTRRDGLGDSKRWVNDRNGSRDPHNSSFELGNNENGADGIRVASGKYYGSELGRYNNRGNRESGHEFIRAPKKQIQKKSALLRLQMVKPNHKNREIEQLPYTNYGDDSSSNTFRGKDQFEYLGFGVKAEERERSPVELDISFKSNSLVAKAIVAPSSSAVSDVDITSVSDTDFASAEKGKNGLASDSDSPDLKPAKPSMAAVNLGGSPCKANLIPSSNKEFNLQKKVSDSCSQLCASVATNCHVKNEGAQTPKGIVSHGITNPCSVKTSQRVVPRVSKKKKIVKKVVKKVTSNRNLNVSSSMSSNMSNGTVKADSVGPSSTSESDKTSLKEKITAVDKVSLPDNLMSSPEEGQLLPDNSKEDVPLLSPGSHTSSQEHEADDNPHIGQVDRIERSENISNSSLGAFSIEDEKNDSDCPNVDDFVHGLHSSLSTDKASKVKSPNGITFSGISNKDDVNMQLCQNEVALSPQQYSHVQYLDNQFQVEDDKNSRLSTSGESVINTDVINTCNSANVSLDCLYSNDLTGNAQKNITVSDFGNDGKVDCKTKALPVSDSVILEENPETCSSVPNCGMFSLSSSSETRISDGQECPRNARVPMHVSDNSPTNSEENIMVLHSVIVKDSVKEASPVDVNASPENCTTEQSPNANFSVRFAEGDTNMSKKRKVETHLKFSSSDIGGISPDPTHTVSLANVHTTLSLLKDSSVSEVLNPYVQSSDICLPSITGENTVLDGKGKVSETEVYFGNGVSNSADRASPLSRINEVTTSDMNVNSLQAELSDAIVVATSCAQVPITISDKKTHQEEGALSSMVKPSASLSLAYPESSAKLYIKSLFGGSVESVDANTNVTKFEYSQLQHPSINFHSLGDLTFPTNQFPLLENEQKENSLPVVPINNIQKDIRVSGNMEIEKIDMQDIEKCESGEFVKRSLSADLESSDPQTKDDSPLEHQSLAVPADTDAVTTSDCSTVSDMLSPGTMPDMLDSRTSDCQAIQNESFHGDEDNVDSRSKVEQDCDLLASTSYSQYTTKKNIKLSPATRHDNLITGKMMPQPLQFDSKVMTQGLNSSCSELNCGKNHLGPAIPSTFQGQSYLNFPKSKISAYSTQASNVRTWHRTGNNSGSLPGNKPSAGSVPTKRSISGKKGNFQNTSYIRKGNNSIVRKHTSVSASPQSSANQSSLGFNEFQKSTGPEIMVEVSNHANLLKTGLTQAPLERQRTPPLPVDTKLPDHMATACEENKSSPLVESHSNAFRDSEPESEPRNFSEPCNAPNSADDAIKLDKTVENLAAPSNNVEGQVEAHDENVSLNSKRIVYVKRKSNQLVATSNSCELSAATDDNVQMASSDGYYKRSKNQLVRTTFESQINQTVTMPTVNSDGHRARKASCNRRFGKRRSLKVVGRSCKPLRASLVWTLCGASSSKKDNDSLHHQKVLPYLFPWKRATYLRSFIYSPALSSNANSLSAISKKLVLSRKRDTVYTRSTHGFSLRKSKVLGLGGYSLKWSKSIEKSSKKANEEATLAVAAVEKKKRERKDVASISSRAKRERIFRIGPVRYRMDSSGRALQRISDDESLVSASLRSGLHLKSSYIPRRLVIGNDEYVRIGNGHQLIRDPKKRTRLLANEKIRWSLHTARQRLARKQKYCQFFTRFGKCNKDDRKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKIIPERMPDCSYFLQGLCTNRKCPYRHVNVNPKASVCEGFLRGYCADGNECRKKHTYVCPTFEATGICIQGTKCKLHHPQKRGKGKKRKRSVDQRNCKRRRYFGSLRIDVSETGTMAVAPRQGEQHKNDLEGELADYISLDVDNEDVAELAEQASEQSTLWDSEPVDIALDDEDELIRPVLIMNKDIRAEASPV 2144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00276 2144 ProSiteProfiles Zinc finger C3H1-type profile. 1954 1980 IPR000571 GO:0046872
Accr3g00276 2144 MobiDBLite consensus disorder prediction 1224 1241 - -
Accr3g00276 2144 SMART c3hfinal6 1899 1927 IPR000571 GO:0046872
Accr3g00276 2144 SMART c3hfinal6 2008 2030 IPR000571 GO:0046872
Accr3g00276 2144 SMART c3hfinal6 1928 1952 IPR000571 GO:0046872
Accr3g00276 2144 SMART c3hfinal6 1954 1979 IPR000571 GO:0046872
Accr3g00276 2144 SMART c3hfinal6 1981 2007 IPR000571 GO:0046872
Accr3g00276 2144 ProSiteProfiles Zinc finger C3H1-type profile. 1899 1928 IPR000571 GO:0046872
Accr3g00276 2144 MobiDBLite consensus disorder prediction 117 133 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 449 471 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 647 664 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 272 296 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 1379 1416 - -
Accr3g00276 2144 Gene3D - 1926 1980 - -
Accr3g00276 2144 FunFam Zinc finger CCCH domain-containing protein 7 1982 2043 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 1429 1448 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 1220 1241 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 39 78 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 174 196 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 566 670 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 90 104 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 1501 1538 - -
Accr3g00276 2144 ProSiteProfiles Zinc finger C3H1-type profile. 1981 2008 IPR000571 GO:0046872
Accr3g00276 2144 MobiDBLite consensus disorder prediction 1 134 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 272 308 - -
Accr3g00276 2144 FunFam zinc finger CCCH domain-containing protein 3 1929 1980 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 566 597 - -
Accr3g00276 2144 PANTHER CCCH ZINGC FINGER 334 2136 - -
Accr3g00276 2144 MobiDBLite consensus disorder prediction 853 878 - -
Accr3g00276 2144 Gene3D - 1981 2046 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr3g00276 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00276 - - pcin:129303221 3298.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00276 3 2994322 3002582 Accr3g00276 3 2994322 3002582 ECH