Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00272 ATGCTGGAGGATTACGCAATGCAATGCCTTTCCTGCGAGGAAGATTACAGCCTAGGACATGCCGGCACCTGCGAAGAGTGCTACAAAGAAGCCAACGAGACTAAGGAGGAGCTCAAGACTGAGATCGATGCCTTGAAGGCCAAAGTTGCCTTCCTCAGCCTCTTGTCTCCTGTTGATAACCATAATCCCTCCGATACTGACGTTATTTTGGTTCCCTCCGATGAGAGTTCTGATCTACCCTCCCTGACTGTTCCGGCTCACAAGGTTGTTCTGGCGAGTCGGTCCCCAGTGTTCAGAGCAATGCTTGAAAATGATATGGAGGAAAGACGAAGTGGTACCATAAAGATTAGTGGTGTATCATACGATGCTCTTCGTGCCTTCGTTGACTATTTATACACTGCAGAAGCATGCCTTGATGACCAAATGGCCTGCGATCTGTTAGTTTTAGCTGAAAAGTATCAGGTGAAGCATCTCAAGGCATGTTGTGAAAAATATCTGATGGCTCGATTGAACTGGGAAAAAGCAGTGGCGAATTATGCCTTTGCTCACCAATACAATGCTAAACAATTGCATGATGCGGCCTTGGCATTAATCACAGACAACATGGACAGGCTTTCTAAGCATGAGGAGTATGAGGATCTGGTGGAGAGTAACCCTCGTATTGTGGTTGAAATCTATGAAGCCTATGTCTCAAAACAGGTTAATACTGCAGCCAGCAAGAAATCTTCCAATAAAAATAGCAAAAAGGCATGA 753 0.4542 MLEDYAMQCLSCEEDYSLGHAGTCEECYKEANETKEELKTEIDALKAKVAFLSLLSPVDNHNPSDTDVILVPSDESSDLPSLTVPAHKVVLASRSPVFRAMLENDMEERRSGTIKISGVSYDALRAFVDYLYTAEACLDDQMACDLLVLAEKYQVKHLKACCEKYLMARLNWEKAVANYAFAHQYNAKQLHDAALALITDNMDRLSKHEEYEDLVESNPRIVVEIYEAYVSKQVNTAASKKSSNKNSKKA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00272 250 ProSiteProfiles BTB domain profile. 66 140 IPR000210 GO:0005515
Accr3g00272 250 Coils Coil 28 55 - -
Accr3g00272 250 Gene3D Potassium Channel Kv1.1; Chain A 37 171 IPR011333 -
Accr3g00272 250 Coils Coil 240 250 - -
Accr3g00272 250 FunFam BTB/POZ domain-containing protein 172 245 - -
Accr3g00272 250 SUPERFAMILY POZ domain 62 167 IPR011333 -
Accr3g00272 250 Gene3D - 172 249 - -
Accr3g00272 250 SMART BTB_4 66 170 IPR000210 GO:0005515
Accr3g00272 250 CDD BTB_POZ_ZBTB_KLHL-like 66 153 - -
Accr3g00272 250 Pfam BTB/POZ domain 64 167 IPR000210 GO:0005515
Accr3g00272 250 CDD BACK 179 214 - -
Accr3g00272 250 PANTHER SPECKLE-TYPE POZ PROTEIN 44 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00272 Accr-Chr3 2960335 2963179 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr3g00272 BTB 9.7e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00272 K10523 - cit:102628895 329.717