Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00266 ATGGAGAGCCCAGATACACATTCTTATGTCATCATTGCATGGGATGCCACCAAAGTTCGAAGTGAGAACGACATCAAGCTCATGGTTGATAACGTTCGAAATAAGAGTGGCATTCTCAGTGCAGGTCACAAACTGCTTGTGCTCGGCCTTCTGTATAAGGTGCCTAATTCCATGGGATACCAGACGTTAGCATCCCCCGAGTCTTTTGCTGGCACTAACTCGCGTGCAATGGAGGACGAGGTTAGGAGGAAAGTGGAAGCCTGTGCAAGCATGCTTTTGCCAACTTTCCAAGTTTGCCAACAAGAGGGGGTCAGCATTGAAGTCAAAGTCGCTGCAGGTTTTCCAGTTAAACAGGTTATTTTACAAGAGATTGCACGCTATAATGCAGATTGGATAATACTCGATAGGCATCTTCGACGAGATCTGAGATATCGTTTGGACAAGATACCGTGTAACGTTGCGTTGGCTAGGGATGATTTCACTGTGGAGACTTGGAGATCTGACCATTCTCGTGAAGCAGATGTCACGGATCACAAGCCTGTCTATTCTCTGTCCCATGTTGTTTCGCTATCAGATGCTCATAATTTTGAACACCCCCAGCATTCTATCCTTCATGGTACCTCAGATTTTCTCGAGGGCCATGCAAAACATTCAAATGCTAGCAGGTCACGGGACAACATTTCTTCATCACATTTTGGATCTTCCTCTAAGCAAGAAAAATCAGGAATAAGCCCCAAAGGTGAATCCAAGCAAAACAAATATGGGCTTCTTCCGAAATCTTCAGATTTTCCAATTATTTGTGCTGGTTGTGGGATAAGGACGGAATGGTGCGCGAAGGAATCAATGAAGTTCAGCTATTCCGACGTACAGAAGGCAACAAACAATTTTTCAAATGATAACTTATTGGGTGAAGGTGGATATGGTCGTGTATACAAGGGTGTGCTTAGAGACGGACAGCAAATTGCAGCCAAGGTGAGAAAAGAAGAAAGCACACAAGGGTTTTCTGAGTTCAATTCTGAGATTTATGTCTTAAGTTTTGCGCGACACAAGAACATAGCGATGCTGCTAGGTTACTGTTGCAAGGAAAGGCAAAATATTCTGGTGTACGAATATATTTGCAATAAATCTCTTCACTGGCATCTGTATGATAAAAACGCAAAAGTTCTGGAGTGGCACCAAAGATATGGCATTGCCATTGGAACTGCAAAGGGATTGCGTTTTCTGCACGAGGGATGTCGCGGAGGCCCAATCATTCACCGAGACATGCGACCAAGCAATATACTTCTCACTCATGACTTTGTTCCCATGCTAGGTGATTTTGGTCTGGCCAAATGGACGATGGATGATGAGACTCTGCGAACAAGGATAATGGGCACATTGGGATACGTTGCTCCAGAGTATGCAGAGGATGGGATTGTTTCAGTGCGGACAGATGTGTATGCGTACGGCATTGTGCTGTTACAATTGATATCAGGACGTAAGGTGGTCAATGACAATCATCTCCCACAAATCTCTCTCCGACAGTGGGCGGAGCCATTGATTGAGAAGTTGGCTTTCAGTGAACTCGTTGACCCTCGTCTTGGGGAATCATATGACACAGAGGAATTATACCTCATGGCCAAAGCAGCATACTTTTGTGTCCAAAGAAACCCCGCGAGGAGACCTACCATGGGAGAGGTTGTGCGACTTCTTGAGGGACAACCTGCCCACCTGGCCATTATGAGAGATACATTTGAACCAGGTTGTTTCAAGTGA 1755 0.4513 MESPDTHSYVIIAWDATKVRSENDIKLMVDNVRNKSGILSAGHKLLVLGLLYKVPNSMGYQTLASPESFAGTNSRAMEDEVRRKVEACASMLLPTFQVCQQEGVSIEVKVAAGFPVKQVILQEIARYNADWIILDRHLRRDLRYRLDKIPCNVALARDDFTVETWRSDHSREADVTDHKPVYSLSHVVSLSDAHNFEHPQHSILHGTSDFLEGHAKHSNASRSRDNISSSHFGSSSKQEKSGISPKGESKQNKYGLLPKSSDFPIICAGCGIRTEWCAKESMKFSYSDVQKATNNFSNDNLLGEGGYGRVYKGVLRDGQQIAAKVRKEESTQGFSEFNSEIYVLSFARHKNIAMLLGYCCKERQNILVYEYICNKSLHWHLYDKNAKVLEWHQRYGIAIGTAKGLRFLHEGCRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWTMDDETLRTRIMGTLGYVAPEYAEDGIVSVRTDVYAYGIVLLQLISGRKVVNDNHLPQISLRQWAEPLIEKLAFSELVDPRLGESYDTEELYLMAKAAYFCVQRNPARRPTMGEVVRLLEGQPAHLAIMRDTFEPGCFK 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00266 584 CDD STKc_IRAK 302 566 - -
Accr3g00266 584 CDD USP_Like 66 143 - -
Accr3g00266 584 Gene3D Phosphorylase Kinase; domain 1 271 371 - -
Accr3g00266 584 ProSitePatterns Tyrosine protein kinases specific active-site signature. 417 429 IPR008266 GO:0004672|GO:0006468
Accr3g00266 584 Pfam Protein kinase domain 297 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00266 584 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 77 160 - -
Accr3g00266 584 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 268 371 - -
Accr3g00266 584 MobiDBLite consensus disorder prediction 214 255 - -
Accr3g00266 584 PANTHER OS01G0750732 PROTEIN 211 566 - -
Accr3g00266 584 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Accr3g00266 584 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 372 573 - -
Accr3g00266 584 Gene3D Transferase(Phosphotransferase) domain 1 373 575 - -
Accr3g00266 584 MobiDBLite consensus disorder prediction 222 248 - -
Accr3g00266 584 ProSiteProfiles Protein kinase domain profile. 296 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00266 584 SUPERFAMILY Protein kinase-like (PK-like) 281 565 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00266 Accr-Chr3 2794037 2798814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00266 284 565 Trihelix Transcription Factor Family AT5G38560 45.862 9.34e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr3g00266 Pkinase 8.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00266 - - vun:114163670 783.482