Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00256 ATGTCGTTAGTTAGATCTGCGGAGTTGCCTGCTACACCTTATACAAATGCCAAGCTCTACTCAATCAAGGGAACTGATGTTAGTCCTGGCTTTCCCTCCCAAATTTTTGGTCCTGATAAGCACAGAAACATGTACATAACCGAATCTTACTCCTGTGAGAGCTACGAGAAGTACTTCCATGATTCACCAACTGAAGAACTGATAGAGACTTCTACTTCCAGCATCTCGGGAAACTCCCTGCCTGATAGCTCTTCCTATCTGGTTGGAGTTAGTTCAGGAACTTCTGTGGTTACTAACAACCCATTTGATATTTCTTTGATGTCCATGAGAAATGGTGATGCCTGTCAGCCCAACTTCGGATCAGACTTCTTGGAAAATGGAAGCCCAGATCCGCTTGACTTTGATGATCAAATGAAACTAAAACTCCAAGAATTTGAGAGGATTCTGCTTGGTGATAACAATGATGATTATGAGGAGGAGTTCATCCTTGGGACTTTTCAAAGCATGGATATTGATGCTGAGTGGGCTGAACCCATTCAGAATGTGCTGCACCATGGCTCACCAAAAGAGTCTTCACCCTCAGATTCTAACCATAGTAGCATCAGCAACATCTCTCCTCGGACCCCAAAGCAATTGCTGTTAGAGTGTGCCTGTGCGATTTCAGAAGGAAATGTAGAGGTAGCGTCATCTATGATAAATGAACTCCGACAGATGGTATCAATTCAGGGGGATCCTCCCCAGAGGATTGCGGCCTATATGGTGGAAGGACTTGCAGCTCGAATGGCTGAATCTGGCAGCAGTATTTATAAAGCACTGAAGTGCAAGGAACCTCCTTCATCAGATCGACTGGCAGCTATGCAAATTTTGTTTGAGGTTTGCCCATGTTTTAAATTTGGATATATTGCCGCAAATGGTGCGATTACAGAGGCAGTTCAAGGTGAAAAGAAGGTTCATATAATAGATTTTGACATCAACCAAGGGAATCAATACATAACTCTGATACAAGCACTTGCTTCAGGGCCAGGTAAGCCACATGTGAGATTGACTGGGGTTGATGATCCCGAGTCTGTCCAACGGTCTGTTGGAGGCCTAAAAAGCATTGGACAAAGACTTGAAAAACTAGCAGAAATACTTGGATTGCCGTTTGAATTTCGAGCAGTGCCATCAAGGTCTTCGCTTGTCACTCCATCGATGCTTGATTGTCGTCCTGGGGAAGCACTTGTGGTGAATTTTGCATTCCAGCTTCATCACATGCTAGATGAGAGTGTTTCAACAGTAAATGAACGGGACCAACTTCTTCGCATGGTTAAGAGCCTGAATCCAAAACTCGTCACGGTTGTTGAACAAGATATGAACACCAATACCCTTCCATTTTTCCCAAGATTTGTGGAAGCCTACAATTACTACTCAGCTGTGTTTGAGTCGCTGGACGCAACTCTTCCTAGAGATAGTCAGGATAGGATGAATGTTGAAAGGCAATGCCTAGCAAGAGACATTGTCAATATCGTTGCATGCGAAGGTGAGGATAGGATTGAACGTTATGAAGTTGCTGGAAAATGGAGGGCAAGGATGAAAATGGCGGGCTTCACTACATCCCCAATGAGTACCAATGTGACTGACGCAATTAAGAAACTCATTAAGGAGTATTGTGACAGGTACAAGATGAAGGACGTGATGGGTGCTCTTCATTTTGGGTGGGAGGACAAGAACTTGATTGTTGCTTCTGCTTGGAGGTGA 1737 0.441 MSLVRSAELPATPYTNAKLYSIKGTDVSPGFPSQIFGPDKHRNMYITESYSCESYEKYFHDSPTEELIETSTSSISGNSLPDSSSYLVGVSSGTSVVTNNPFDISLMSMRNGDACQPNFGSDFLENGSPDPLDFDDQMKLKLQEFERILLGDNNDDYEEEFILGTFQSMDIDAEWAEPIQNVLHHGSPKESSPSDSNHSSISNISPRTPKQLLLECACAISEGNVEVASSMINELRQMVSIQGDPPQRIAAYMVEGLAARMAESGSSIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGYIAANGAITEAVQGEKKVHIIDFDINQGNQYITLIQALASGPGKPHVRLTGVDDPESVQRSVGGLKSIGQRLEKLAEILGLPFEFRAVPSRSSLVTPSMLDCRPGEALVVNFAFQLHHMLDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTLPFFPRFVEAYNYYSAVFESLDATLPRDSQDRMNVERQCLARDIVNIVACEGEDRIERYEVAGKWRARMKMAGFTTSPMSTNVTDAIKKLIKEYCDRYKMKDVMGALHFGWEDKNLIVASAWR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00256 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 573 IPR005202 -
Accr3g00256 578 MobiDBLite consensus disorder prediction 185 204 - -
Accr3g00256 578 ProSiteProfiles GRAS family profile. 200 578 IPR005202 -
Accr3g00256 578 MobiDBLite consensus disorder prediction 183 204 - -
Accr3g00256 578 Pfam GRAS domain family 210 578 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00256 Accr-Chr3 2695017 2696753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00256 1 578 GRAS Transcription Factor Family AT1G21450 61.824 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g00256 GRAS 8.1e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00256 - - gmx:100807048 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00256 3 2695017 2696753 Accr4g00300 4 2907670 2909409 CCT
Accr3g00256 3 2695017 2696753 Accr3g00256 3 2695017 2696753 ECH