Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00247 ATGGATAAGGGGCGGGTTTTGATTTGCGAAGGTCTTGGAATTCTCGAAATGGGTTGGTGTTGGTTGGTTGGGATTTTGATTGTTTTGGCCAATGCGTGGTCCTTGGCCCAAGGGTACCCCTCGGAAGATCTGGTGGTGAGTCTCCCCGGTCAACCCAAGGTTGGGTTTAGGCACTATGCTGGGTATGTTGATGTAGATGTTAGCCATGGAAGGAGTTTGTTCTACTACTTTGTGGAGGCTGATAAAGACGCCGACCTGAAGCCCCTTACTCTCTGGCTCAATGGAGGTCCGGGATGTTCCTCCATCGGAGGAGGTGCCTTCACTGAATTGGGCCCCTTCTATCCTCAAGGTGATGGCCGAGGTCTCCGAAGAAATACAATGTCTTGGAATAGAGCATCTAACCTCTTGTTTGTGGAGTCCCCCGCCGGCGTTGGGTGGTCATACTCGAATACAACTTCAGATTATACCTGCGGAGATGCTTCCTCCGCCAATGACATGTATCTATTCATGTTGAAATGGTACGAGAAATATCCTACATTCAGAACAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCAAATGCTCTGCTGAACCATAACGAAGCCTCGGGTGACTTCAAAATCAATATTAAAGGAGTTGCTATTGGAAACCCACTGCTGAGACTTGATCGGGACATTCCATCAACATATGAATTCTTCTGGTCGCACGGAATGATTTCTGATGAAATAGGCCTTGCTATTACAAATGAGTGCGATTTTGACGATTATACCTATGCTAGTCCTCACAATGTGTCCGATTCTTGCAACCATGCCATATCGGAGGCAGATCACATAGTTGGGGAGTACATCAACAACTATGATGTGATTCTGGATGTTTGCTATCCATCCATAGTTGAACAAGAGCTGAGATTAAAAAAGATGGCTACCAAAATGAGTCTGGGCGTAGATGTTTGTATGACCTATGAAAGACGTTTTTACTTCAATCTTCCTGAGGTTCAGAAGGCCCTCCATGCTAATCGAACCAATCTCCCATATTCCTGGTCTATGTGTAGCAGCATTTTAAATTATAGTGACACTGATGGGAACATTAATATCCTTCCGATTCTCAAGAGGATCGTTGAAAATAACATCCCAGTTTGGGTTTTCAGTGGGGACCAAGATTCAGTGGTGCCATTACTAGGTTCTAGAACACTGGTTCGTGAACTAGCCCATGACCTGAAGTTGGGCGTGACGGTTCCATATGGAGCATGGTTCCACAAAGGGCAGGTGGGAGGTTGGGCAACAGAGTATGGGAACTTGTTGACATTTGCGACGGTGAGAGGGGCTGCTCACATGGTGCCTTACGCACAGCCTTCCAGATCTCTCCATCTTTTCAGTTCATTTGTGCGTGGCCGCCGCTTGCCCAACGCCACTCGTTCTTCCATTGATGACTGA 1458 0.4678 MDKGRVLICEGLGILEMGWCWLVGILIVLANAWSLAQGYPSEDLVVSLPGQPKVGFRHYAGYVDVDVSHGRSLFYYFVEADKDADLKPLTLWLNGGPGCSSIGGGAFTELGPFYPQGDGRGLRRNTMSWNRASNLLFVESPAGVGWSYSNTTSDYTCGDASSANDMYLFMLKWYEKYPTFRTRELFLTGESYAGHYIPQLANALLNHNEASGDFKINIKGVAIGNPLLRLDRDIPSTYEFFWSHGMISDEIGLAITNECDFDDYTYASPHNVSDSCNHAISEADHIVGEYINNYDVILDVCYPSIVEQELRLKKMATKMSLGVDVCMTYERRFYFNLPEVQKALHANRTNLPYSWSMCSSILNYSDTDGNINILPILKRIVENNIPVWVFSGDQDSVVPLLGSRTLVRELAHDLKLGVTVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRSLHLFSSFVRGRRLPNATRSSIDD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00247 485 Gene3D - 373 472 - -
Accr3g00247 485 Gene3D alpha/beta hydrolase 40 302 IPR029058 -
Accr3g00247 485 SUPERFAMILY alpha/beta-Hydrolases 41 475 IPR029058 -
Accr3g00247 485 FunFam Carboxypeptidase 39 303 - -
Accr3g00247 485 FunFam Carboxypeptidase 373 472 - -
Accr3g00247 485 Gene3D - 326 362 - -
Accr3g00247 485 Pfam Serine carboxypeptidase 50 472 IPR001563 GO:0004185|GO:0006508
Accr3g00247 485 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Accr3g00247 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Accr3g00247 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Accr3g00247 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Accr3g00247 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Accr3g00247 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 459 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00247 Accr-Chr3 2610563 2613689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00247 332 475 Calmodulin-binding Proteins AT2G22960 25.694 5.41e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00247 K16297 - gmx:100801752 822.772