Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00222 ATGACGACCCCCACCACTCACCCCATTTCCCGACCTCAAATGCCTCCGTCTCGCAAATCATCTTCTTCTCCAACTCCTATCCCCTCCCCTCTTTCATCTAATTCTCCTTTTGACCTCAAACAAACTGACGTTGATGCCTCTGGCAATGCCGCTTGTTTCGTTCACAGCACGGAGCGATTGACTCCCGACCGCCGCCGCCTTACTCGAGCCAGGAAGCTTCGATACCTCTCTGACCATGATGTTGGCTTGCACCTTACTGACGATTCTTCGCTCCTGCCTTCCCCTCCGTCCTCTCGCAAGACTCGCTCATCGGGTGGTTCTGAACACTGGTCCTCCACCGCTGTGCCTCAACCCCTGCCGCTTCCCGATTCACCGTTGACTCGCCGACCGGAGTCAACCGGTCCTAATCCTGGACAGTCCCATCTCGGATCCCCTTTCGTAGACCATTCGGGATTTGCTTTCGGGAGGAAAACGGTGGATCAAGATGCATTCATGGACATGAAGTCTTGGAGTAATATGGATAGATCTTGTGATCCAACCACTGCAAACTCAAAGTTTCATTTGAGAGTAAACATCCCGGTTGCCAGTTTCTTGACTGGTCATAGTTCATGTAAAGATCGAACAATCTCTCATGATACTGACTCTGAAAATATTTATGACTCAAGACGGCGTGTGGCCGCAAAGAGTGCCCCAACAAGTGTTTTTTCCAGTCCTGTTTCAAGTCCACGGAGATCTAGCAATGTAGATTTCACTGATCATTTCTTTAGTACTCAAGAATATCTTGACAACCCTGTTGTTCATCTTACGAAAGTGTCTCCGCACTTCACTGTTCAAAGTCCAGACCATTCTTCCCTCCGTAGCCCAGGGTGCCGTAGTCCTTTCCCCAGTCGCAAAGTCCAAGATAATAGATTTCATTCCAGGGCGTGGCCAGAAAATAACCATGTTGACGCACATGCTTTGCCTCTCCCTCTTCCTCCTGGAGCTTCACCTCCAGCACCATCATTTCCCCAGTGTCAATCTAGTCCCATGCATCACTCATTCGAAAGTCAATTTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATCGGACGGGGCACTTTTGGAAGTGTTTATCATGCAACAAACCTAGAGACCGGTGCTTCATGCGCAATGAAGGAGGTGGATCTCATTCCAGATGACCCTAACTCTGCCAACTGTATAAAGCAACTAGAGCAGGAAATCAAGATTCTTCGTCAACTACACCATCCAAATATTGTGCAGTATTATGGCAGTGAAATTATTGGTGATCACTTGTGCATATATATGGAATACGTTCATCCAGGGTCGGTTGATAAATTTGTGCGGGCAAATGGTGAAGCGATGACAGAGTCTGTAGTTCGCAATTTTACAAGGCATACTCTCTCGGGGTTGGCTTACCTGCACAGTACCAAAACTATCCACAGGGACATCAAAGGAGCAAACTTACTTGTTGATGCATCAGGCACTGTCAAGCTTGCTGATTTTGGAATGGCAAAAGCTCTAACAGGGAAATCATATGAACTTTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGGTCATTAAGGCTGCGATGAGAAAAAATGACAATCCTGACCTTGCCTATGCTGTTGATATCTGGAGCTTAGGTTGCACTATCATTGAGATGCTAACGGGTAGACCTCCCTGGAGTGGCTTTGAAGGGCCTCAAGCCATGTTCAAGGTACTGCACAATTCGCCACCGATACCTGAAACACTATCTTCAGCAGGAAAGGATTTTCTTCAGGGATGTTTTGAAAGGGATCCTGCAAATCGGCCATCAGCAGTTAAGCTTCTTGAGCACGCCTTTGTACAAAATTTGCCTGATCAAGATGCTTTAGCTCGCCCACAATTATATCCTAGAGAAAACCCTGAAGAAAATTCACGTAGTCCCAAAGACACTCCTACGCATAAACGTGATGTAATTCGAGCCTCTATAGGTGCCCGGTTCATCAACAAAATCCAGAAGTTGATCGGTGATTCTTCCCAACAACATAATGCTGAGGATTCTAAATATTCTACATCTCATCATCGTCCTTACTCTCTGCCAGAAGTTAAAATTACTCAGTCGTCCTTGAAACCAGCTGCCCTCAATTACGCTTCTGCTTCAAAATCCAGCAACATGCCCATCGCTGTAAAGAGAGTCATCACGCACCTTTGA 2202 0.4655 MTTPTTHPISRPQMPPSRKSSSSPTPIPSPLSSNSPFDLKQTDVDASGNAACFVHSTERLTPDRRRLTRARKLRYLSDHDVGLHLTDDSSLLPSPPSSRKTRSSGGSEHWSSTAVPQPLPLPDSPLTRRPESTGPNPGQSHLGSPFVDHSGFAFGRKTVDQDAFMDMKSWSNMDRSCDPTTANSKFHLRVNIPVASFLTGHSSCKDRTISHDTDSENIYDSRRRVAAKSAPTSVFSSPVSSPRRSSNVDFTDHFFSTQEYLDNPVVHLTKVSPHFTVQSPDHSSLRSPGCRSPFPSRKVQDNRFHSRAWPENNHVDAHALPLPLPPGASPPAPSFPQCQSSPMHHSFESQFSMKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDLIPDDPNSANCIKQLEQEIKILRQLHHPNIVQYYGSEIIGDHLCIYMEYVHPGSVDKFVRANGEAMTESVVRNFTRHTLSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGMAKALTGKSYELSLKGSPYWMAPEVIKAAMRKNDNPDLAYAVDIWSLGCTIIEMLTGRPPWSGFEGPQAMFKVLHNSPPIPETLSSAGKDFLQGCFERDPANRPSAVKLLEHAFVQNLPDQDALARPQLYPRENPEENSRSPKDTPTHKRDVIRASIGARFINKIQKLIGDSSQQHNAEDSKYSTSHHRPYSLPEVKITQSSLKPAALNYASASKSSNMPIAVKRVITHL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00222 733 MobiDBLite consensus disorder prediction 1 43 - -
Accr3g00222 733 SUPERFAMILY Protein kinase-like (PK-like) 334 646 IPR011009 -
Accr3g00222 733 MobiDBLite consensus disorder prediction 276 298 - -
Accr3g00222 733 MobiDBLite consensus disorder prediction 672 692 - -
Accr3g00222 733 MobiDBLite consensus disorder prediction 639 653 - -
Accr3g00222 733 ProSiteProfiles Protein kinase domain profile. 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00222 733 MobiDBLite consensus disorder prediction 84 147 - -
Accr3g00222 733 FunFam Predicted protein 353 640 - -
Accr3g00222 733 SMART serkin_6 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00222 733 MobiDBLite consensus disorder prediction 90 114 - -
Accr3g00222 733 MobiDBLite consensus disorder prediction 1 42 - -
Accr3g00222 733 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Accr3g00222 733 Gene3D Transferase(Phosphotransferase) domain 1 354 656 - -
Accr3g00222 733 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 68 631 - -
Accr3g00222 733 Pfam Protein kinase domain 358 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00222 733 MobiDBLite consensus disorder prediction 634 653 - -
Accr3g00222 733 MobiDBLite consensus disorder prediction 276 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00222 Accr-Chr3 2392050 2397294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00222 63 620 MAP Kinase Kinase Kinase AT5G66850 47.218 3.78e-147 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr3g00222 Pkinase 2.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00222 - - pcin:129303344 1159.44