Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00205 ATGTTTACCACATCGCATCCTGTAATTCGAAGCTTGACAAGCTTGCCAGACCTGTCCTTGAACATAAGACCACCATGTATTTCAGAATGGGAGGCCAAAGAGGTTAGGAGCAAAGCACTTTACAATGATATATACTCAACATCTGATTCTGGTAGCAGTGCTGGAAGTGACTTAAGCCATGAGAATAGCTTTCTTCATCACCCTGGCCATCCTGAGCCCACGTTGAGCCTTGGGTTAGAAACCCCTGATTTGATGAATCATCCCCATCTTTTACAGGCAATCTCAAGGAACGTTAATCATCATCACTACCACAACCACCAACCCCACATTTATGGCAGGAGCTTTAAACGAAATGCAAGAGTCATTAATGGTGCCAAAAGAAGCGTTAGAGCTCCTAGAATGAGATGGACCACAACTCTCCACGCCCAGTTTGTTCGTGCTGTCCAGCTCCTTGGCGGTCATGAAAGGGCCACTCCAAAGTCGGTATTAGAGTTGATTAATGTTAAGGATCTAACCTTAGCCCACGTCAAGAGTCACTTGCAGATGTACAGAACAGTGAAGAGCACCGACAGAGCTACAGGTCAAGGGCAGGCAGATATGGGTTTGAACCGAAGGCCGGAGAACAACGTGGATATGCATGGAGCTTCAGGCTGTGAGGGAGCCCGTTTATCATCACCACAATGGCTCCAGAAATCCCTCAGAGCATCATGGCAATCGTCAATGGAGACAAATACAAATGACAGCAGACAAACCCCCCAAATTGATGATTTGACTCATTCTCACGATCTCAAGGCAAAGGAAAGAAAGGTGGATGGAGCTAATAAAGGGCTGTGGAATTGCGTGAATGAGAGGTTGGATTGTAGCCATTTGTCACGTTCGGATTTGATGCTTGACCTGGAGTTCACTCTCGGAAGACCCAGTTAG 924 0.4654 MFTTSHPVIRSLTSLPDLSLNIRPPCISEWEAKEVRSKALYNDIYSTSDSGSSAGSDLSHENSFLHHPGHPEPTLSLGLETPDLMNHPHLLQAISRNVNHHHYHNHQPHIYGRSFKRNARVINGAKRSVRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELINVKDLTLAHVKSHLQMYRTVKSTDRATGQGQADMGLNRRPENNVDMHGASGCEGARLSSPQWLQKSLRASWQSSMETNTNDSRQTPQIDDLTHSHDLKAKERKVDGANKGLWNCVNERLDCSHLSRSDLMLDLEFTLGRPS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00205 307 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 307 IPR044847 GO:0000976|GO:0006355|GO:0010158
Accr3g00205 307 MobiDBLite consensus disorder prediction 51 71 - -
Accr3g00205 307 MobiDBLite consensus disorder prediction 237 253 - -
Accr3g00205 307 FunFam Myb family transcription factor 130 188 - -
Accr3g00205 307 Pfam Myb-like DNA-binding domain 133 184 IPR001005 -
Accr3g00205 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 185 IPR006447 GO:0003677
Accr3g00205 307 SUPERFAMILY Homeodomain-like 129 186 IPR009057 -
Accr3g00205 307 Gene3D - 131 188 - -
Accr3g00205 307 MobiDBLite consensus disorder prediction 237 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00205 Accr-Chr3 2206361 2208650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00205 1 226 G2-like Transcription Factor Family AT5G42630 49.351 1.57e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr3g00205 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00205 - - gmx:100780143 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00205 3 2206361 2208650 Accr4g01088 4 10333057 10336205 CCT
Accr3g00205 3 2206361 2208650 Accr3g00205 3 2206361 2208650 ECH