Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00195 ATGAAGCGAGGAGAGCAACCACAGTCTCCTTGTCTAACAGACTTGCAGCCAGATAAATTAAGTTGCTTACCAGGTCATGTTATTGATCAGATTCTGTCACATTTGTCAATTCGGGAAGCAGTGAGGACTAGTGTTTTATCCAGCAAATGGAGGTACAAATGGTCTACTCTACCAAATCTTGTGTTTGATAACCAGTGTCTCCCCATATCTTCCCAAGATCATTCAATTATCAAGAACAAGCTTGTGAGAATTATTGATCACGTGCTTTTGCTTCACTCTGGTGCCATAAACAAGTTTAAACTCTCCCATCGTGATCTAATTGGTGTGATTGATATTGATCGTTGGACTCTTTATCTAACCAGAAGATCTATCAAAGAGCTTGTGCTGGAAATCTGGAAAGGGCATCGTTACAAGATACCCTCTTGTTTATTTACTTGCCAAAGTTTAATTCATTTGGAATTATTTAACTGCTGGCTTAAGCCTCCATCAACATTTATAGGCTTCAGGAACTTGAAGAGTCTTGATCTACAGCATGTTACTATGGATCAAGATGTGTTTGAAAACTTGATATCTAACTGCCCACTGCTTGAACGCCTAACACTGATGAACTTTGATGGGCTCACTCATCTCAACATCGATGCACCGAATCTTCAGTTTTTTGACATTGGAGGCAAATTTGAGGATGTTACATTTGAAAACACTTTCCATTTAGCTGTTGTATCCATTGGTTTGTATTTGAACCTTGAAAATGAGAAAAATAGATGGCAAGGAAGTTCTAGCAATTTGCTCAAGTTCTTTGTTCATTTACCTCATGTTAGAAGGTTGGAGGTTCAAAGCTATTTTTTAAAGTATTTGGCAGTAGGAGTTGTGCCACTAAAGCTTCCTAGACCATGCGTAGATTTAACTTATCTTTCCATACGCATCAATTTCAATGATTCCAAGGAAATTTCAGCTGCTTTGTGCCTTTTCAGGAGTTCTCCGAACCTTCAAGAACTGGAGGTGTTGGCTCGCACTGAGGAGCAACAGAGTACTCTGGGAATACAGGCATACAGTCGGGAGGATGAGTATTGGAATTGCCCAGTGGTGCAACTACAATATGTGAGGATGGACGGTATCTCTGGCATCAAACCCGAACTAAATTTTATCAGCTTTCTGCTTTTATATTCTCCCGTTCTGGAACGGATGACTGTGAAGCCTGCTTCTTCAAATGGAGGATCAGAGTTAATGAAAGAATTATTGCGGTTTAGGAGAGCATCAGGGCTTGCTGAAATTATATACCTGGATCCTTGA 1290 0.4 MKRGEQPQSPCLTDLQPDKLSCLPGHVIDQILSHLSIREAVRTSVLSSKWRYKWSTLPNLVFDNQCLPISSQDHSIIKNKLVRIIDHVLLLHSGAINKFKLSHRDLIGVIDIDRWTLYLTRRSIKELVLEIWKGHRYKIPSCLFTCQSLIHLELFNCWLKPPSTFIGFRNLKSLDLQHVTMDQDVFENLISNCPLLERLTLMNFDGLTHLNIDAPNLQFFDIGGKFEDVTFENTFHLAVVSIGLYLNLENEKNRWQGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAVGVVPLKLPRPCVDLTYLSIRINFNDSKEISAALCLFRSSPNLQELEVLARTEEQQSTLGIQAYSREDEYWNCPVVQLQYVRMDGISGIKPELNFISFLLLYSPVLERMTVKPASSNGGSELMKELLRFRRASGLAEIIYLDP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00195 429 PANTHER F-BOX PROTEIN-LIKE 18 401 - -
Accr3g00195 429 SUPERFAMILY RNI-like 119 333 - -
Accr3g00195 429 Gene3D Ribonuclease Inhibitor 89 411 IPR032675 -
Accr3g00195 429 ProSiteProfiles F-box domain profile. 17 65 IPR001810 GO:0005515
Accr3g00195 429 SMART 9598neu4hmm 358 427 IPR006566 -
Accr3g00195 429 Pfam Leucine Rich Repeat 170 194 IPR013101 -
Accr3g00195 429 SUPERFAMILY F-box domain 16 61 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00195 Accr-Chr3 2080071 2083692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00195 18 237 EF-hand Containing Proteins AT5G41840 25.620 4.87e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00195 - - gmx:100782183 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00195 3 2080071 2083692 Accr3g00195 3 2080071 2083692 ECH