Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00171 ATGGCACTCTTCCCCCTACCCTTTCACACTTTTGCATTTCTCGTCCTCTTTCATGCGTTCGACATTGCCTATTGTCAATCTTTTATTGGCGTTAACTATGGTCAAGTCGCCGACAATCTTCCCCCACCATTGGCCACCGCCAGGCTTCTTCAATCCACATTCATAGAGAAGGTCCGGTTGTACGGATCAGATCCTGCCATAATCAAAGCCCTCGCCAACACTGGCATAGGAATCGTCATCGGAGCAGCAAACGGCGACATACCCGCTCTTGCTTCCGATCCCAACTTCGCAAAAAACTGGATCAACTCCAACGTGATTCCCTTTTACCCTGCTAGCAACATCATCCTCATCACGGTGGGAAACGAGGTCATGACCTCTAAAGACCAGAATCTGATCAATCAATTGCTACCGGCAATTCAGAATCTCCACAATGCCCTCAATACCGCATCTCTGGGCGGAAAGATTAAGATCTCCACCGTACATTCCATGGCGGTGCTGAGGCAATCCGAACCTCCGTCATCCGGACGGTTCCACGCAAGCATGATGAACGTATTGAAGGCATTGCTTGGGTTTAACAACGCCACCGGTTCGCCCTTCGCAATCAATCCTTACCCATACTTTGCGTACAAGAGCGATCCGAACAGGCCTGAGAACTTAGCGTTTTGTCTCTTTCAACCAAACTCAGGCCGATTTGATTCGAACACAAAAATCAAGTACATGAACATGTTCGATGCTCAGGTTGATGCAGTTCGTTCTGCTTTGAATTCCATGGGATTTAAGAACGTGGAGATTGTGGTTGCCGAGACTGGCTGGCCGTACAGGGGAGACAGAGATGAGGTTGGTCCAAGTCTTGAGAATGCCAAGGCTTATAACGGTAACTTGATCGCTCACCTTCGTTCCAAGGTTGGGACCCCATTGATGCCAGGGAAATCGGTAGACACGTATATCTTTGCGCTCTACGACGAGGACTTGAAGCCTGGGCCTACTTCCGAGCGCGCCTTTGGGCTTTTTAAACCTGATCTATCCATGACCTATGACGTTGGGCTCGCCAAGGATAACCAGGCTGCCAATAATACAAAGAATGATGTATGGTGTGTGCCAAAACCAGGCGTATCGGACGCCCAACTTCAAGCAAATTTGGATTATGCGTGTGGACATGGGATTGATTGTGGCTCAATCCAATATGGTGGGGCCTGTTTTGAGCCCAACACAGTTCTATCACATGCGGCATATGCCATGAACCTCTATTACCAAACTTCTGGTCGAAATCCATGGAATTGTGATTTTTCCCATACCGCCATGTTGTCATCTAGTAATCCCAGTTATAATAGCTGTGTTTATCCCGGTGGAAGCATCTAA 1359 0.4827 MALFPLPFHTFAFLVLFHAFDIAYCQSFIGVNYGQVADNLPPPLATARLLQSTFIEKVRLYGSDPAIIKALANTGIGIVIGAANGDIPALASDPNFAKNWINSNVIPFYPASNIILITVGNEVMTSKDQNLINQLLPAIQNLHNALNTASLGGKIKISTVHSMAVLRQSEPPSSGRFHASMMNVLKALLGFNNATGSPFAINPYPYFAYKSDPNRPENLAFCLFQPNSGRFDSNTKIKYMNMFDAQVDAVRSALNSMGFKNVEIVVAETGWPYRGDRDEVGPSLENAKAYNGNLIAHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGPTSERAFGLFKPDLSMTYDVGLAKDNQAANNTKNDVWCVPKPGVSDAQLQANLDYACGHGIDCGSIQYGGACFEPNTVLSHAAYAMNLYYQTSGRNPWNCDFSHTAMLSSSNPSYNSCVYPGGSI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00171 452 Pfam X8 domain 364 434 IPR012946 -
Accr3g00171 452 Gene3D Glycosidases 28 356 - -
Accr3g00171 452 Gene3D - 357 447 - -
Accr3g00171 452 SMART X8_cls 363 447 IPR012946 -
Accr3g00171 452 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
Accr3g00171 452 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Accr3g00171 452 FunFam glucan endo-1,3-beta-glucosidase 7 359 448 - -
Accr3g00171 452 FunFam Glucan endo-1,3-beta-glucosidase 14 27 355 - -
Accr3g00171 452 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 434 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00171 Accr-Chr3 1883088 1885049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00171 26 448 Miscellaneous Gene Families AT2G16230 68.372 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00171 - - qsa:O6P43_018822 746.503