Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00169 ATGTTCAAGTCCCAGAACAAAGGCAAACAAGTTCAGGAAAGCAGCGACGTTTACACTGCATCAAAGATTGAGGAGCTCAGGACTGAGATTGGGCCCTTATCTGGACGCAGCTTAAAGTACTGCACTGATGGTTGTTTGAAGGGCTATCTGGAAGCTAACAATTGGAATGTGAAAAAAGCCAAGAAGATGTTAGGACACACACTAGAGTGGAGATCAACCTACAAGCCTGAAGAAATCCGCTGGCATGAGGTTGCAAAGGAAGGAGAGAGGGGGATAATATACAGAGCAAGTTTTCATGACCGACAGGGAAGGACAGTTCTCATTTTCAGAACTGGGATTCCAATTCCGAAAATAACTTCAATTGAGAGTTTGATAAGGTTCGATGTGCATCTTCTGGAAAATGCGGTGCTTAACTTCGAGCAAGGTCAACACCAAATGGCGTGGTTGATAGATTTCACTGGATGGTCACTTACCAATATGTCCATAAGACTAGCTAGAGAGTTTCTTAACATTCTACAAAATCACTTTCCAGATAGGGTTGCCGTAGCATTTCTTTACAATCCTCCACGGGCTTTTGAGACTTTTTTAAAGATAATCAAGTACCTCCTGGATAACAAAACACTTGAAAAGGCCAAGTTCGTGTACCCCAAAGAGAAAGAAAGCGTGGATCTTATGAAGTCGTATTTTGATGAAGAAAATCTTCCCATGGAATTTGGGGGGAAAGCTACAATGAAGTATGACCATGAGGAATACTCTAGATTGATGACTCAGGATGATTTGAAATCCGCTGCGTTTTGGGGAGCTGATGACGGCCAATCAAGCCACGTTGGAGCTGGCCAATCCAGTGCCTAA 852 0.4308 MFKSQNKGKQVQESSDVYTASKIEELRTEIGPLSGRSLKYCTDGCLKGYLEANNWNVKKAKKMLGHTLEWRSTYKPEEIRWHEVAKEGERGIIYRASFHDRQGRTVLIFRTGIPIPKITSIESLIRFDVHLLENAVLNFEQGQHQMAWLIDFTGWSLTNMSIRLAREFLNILQNHFPDRVAVAFLYNPPRAFETFLKIIKYLLDNKTLEKAKFVYPKEKESVDLMKSYFDEENLPMEFGGKATMKYDHEEYSRLMTQDDLKSAAFWGADDGQSSHVGAGQSSA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00169 283 CDD SEC14 99 241 IPR001251 -
Accr3g00169 283 SMART sec14_4 87 243 IPR001251 -
Accr3g00169 283 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 246 IPR001251 -
Accr3g00169 283 Pfam CRAL/TRIO domain 99 240 IPR001251 -
Accr3g00169 283 SUPERFAMILY CRAL/TRIO N-terminal domain 18 83 IPR036273 -
Accr3g00169 283 PANTHER GH16843P 9 270 - -
Accr3g00169 283 Gene3D - 3 275 IPR036865 -
Accr3g00169 283 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Accr3g00169 283 SUPERFAMILY CRAL/TRIO domain 81 256 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00169 Accr-Chr3 1862092 1863280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00169 40 235 Acyl Lipid Metabolism Gene Families AT1G55840 26.667 2.23e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00169 K26544 - gmx:100790867 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00169 3 1862092 1863280 Accr3g00169 3 1862092 1863280 ECH