Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00148 ATGGGTTGGACCAGAGAAGAGAACAGAAGATTTGAGGATGCACTTGCAGTGTATGGGCCGGAAGACCCAAACAGGTGGCAACATGTGGCGAACGCGGTGGCCGGAAAATCGCCACAACAAGTGAAAAGGCACTATGAGATCCTCATGGAGGACGTGAATCGAATTGAGCGTGATGAAGTCCCTTTACCAAGATATGTTCACTCCAGGCGAACTGCCCAAGACCCCTGCGGGATGATGAGGAATCTAAATCTTCGTTGA 258 0.5039 MGWTREENRRFEDALAVYGPEDPNRWQHVANAVAGKSPQQVKRHYEILMEDVNRIERDEVPLPRYVHSRRTAQDPCGMMRNLNLR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00148 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 72 IPR044636 GO:0003700
Accr3g00148 85 Gene3D - 1 62 - -
Accr3g00148 85 SMART sant 3 51 IPR001005 -
Accr3g00148 85 FunFam Transcription factor SRM1 1 62 - -
Accr3g00148 85 CDD SANT 3 45 IPR001005 -
Accr3g00148 85 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Accr3g00148 85 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Accr3g00148 85 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Accr3g00148 85 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Accr3g00148 85 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00148 Accr-Chr3 1703790 1704551 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr3g00148 Myb_DNA-binding 7.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00148 - - gmx:100786029 127.102