Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00128 ATGGACTCGCCCAGTGGAAATTCCTCCATGTCCACCAAACTTCAGAGCTCTGGTTCTGAAGAGGATTTGCAGGCTTTGATGGATCAGAGGAAAAGGAAGAGAATGCAATCGAATCGGGAATCGGCAAAGCGATCTCGCATGCGGAAGCAGAAGCAGATGGATGATCTGATGGGACAGGTGAGTGAGCTGAGAAAGGAAAATAGCGAAATCCTGACGAGCATAAACATCACCACACAACACTTTGTGAGAGTTGAGGCCGAAAACTCTGTACTGAGGGCTCGAATGGCAGAACTTAGCCACAGACTCCAATCACTGAACGATATCCTCAGTTACATCAACACCAGCACTGGGGTGTATGAAACCGATTGCTATTCAATGAGAGCAGATAGCTTTATGAATCCCATGGACACGCTTTTTCTTAATCATCCCATTTTGGCTTCTGCAGACACTTTTATGTGGCAAGGTGAATGA 471 0.4628 MDSPSGNSSMSTKLQSSGSEEDLQALMDQRKRKRMQSNRESAKRSRMRKQKQMDDLMGQVSELRKENSEILTSINITTQHFVRVEAENSVLRARMAELSHRLQSLNDILSYINTSTGVYETDCYSMRADSFMNPMDTLFLNHPILASADTFMWQGE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00128 156 Coils Coil 32 66 - -
Accr3g00128 156 Gene3D - 28 83 - -
Accr3g00128 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 149 - -
Accr3g00128 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Accr3g00128 156 MobiDBLite consensus disorder prediction 24 56 - -
Accr3g00128 156 MobiDBLite consensus disorder prediction 1 56 - -
Accr3g00128 156 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Accr3g00128 156 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Accr3g00128 156 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Accr3g00128 156 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g00128 156 FunFam BZIP transcription factor 28 79 - -
Accr3g00128 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Accr3g00128 156 Pfam bZIP transcription factor 30 73 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00128 Accr-Chr3 1566629 1567099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00128 24 153 bZIP Transcription Factor Family AT4G34590 52.518 7.84e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr3g00128 bZIP_1 6.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00128 K25786 - vvi:100855209 207.994