Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00122 ATGGAAAGCATTCAAAAAATCTCGACTTCAAAGCTGCTGATTTTGTTCTTCACAACCTTGTTTCTGTATTCTGAGCTTACCCAGTGTAGCGTAACTTACGATAGAAAGGCCATCATCATCAATGGCCAAAGGAAAATTCTCATCTCTGGCTCCATTCACTACCCGAGAAGCACTCCACAAATGTGGGAGAATCTCATTCAGAAGGCTAAAGATGGAGGCTTAGATGTCATTGACACTTATGTCTTCTGGAATGTCCACGAACCATCCCCTGGCAAGTACAACTTTGAAGGGAGATACGATTTGGTGCAGTTCATTAAGACAGTGCAGAAGGCGGGACTTTATGTTCATCTTCGCATTGGGCCTTATGTGTGCGCCGAGTGGAACTATGGAGGATTTCCTGTATGGTTGAAGTATGTTCCTGGCATCAGCTTCAGAACAGACAATGGGCCTTTCAAGGCGGCAATGGGTGGCTTCACCCAGAAAATTGTCCAGATGATGAAAAATGAAAAGCTATACCAATCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAACGAGTATGGACCAGAAGGCAGGGAATTGGGAGGTGCAGGTCGTGCATACATAAACTGGGCTGCAACTATGGCAGTTAAATTGGATACGGGAGTTCCGTGGGTGATGTGCAAGGAAGATGACGCCCCAGATCCTGTGATAAATGCATGTAATGGTTTTTACTGTGATTATTTCTCTCCTAATAAACCCTACAAGCCCACCCTGTGGACTGAGTCTTGGAGTGGCTGGTTCACAGAATTTGGAGGCCCAAATCATCAGCGACCAGTTCAAGATCTGGCATTTGCAGTTGCTCGATTCATACAAAAGGGTGGCTCATTTGTCAATTATTACATGTATCATGGAGGAACCAACTTTGGACGCTCAGCTGGAGGCCCTTTCATTACTACAAGCTATGACTATGATGCTCCAATGGATGAATATGGCTTGATCAGGGAACCCAAATACAGTCATTTGAAGGAGCTTCACAAAGCTATCAAGCAATGTGAACCTGCTTTGGTGTCTTCGGATCCTACTACTACATCACTAGGAACGTATCAGCAGGCTCATGTATTCTCTTCAGGCAGCGGAGCATGTGCAGCTTTTCTGGCAAACTATAATACGAAATCTTCTGCTAGAGTGACATTTAATAACAACCACTATGATTTGCCTCCTTGGTCTATAAGTATTCTCCCTGATTGCAGAAATGTCGTATTTAACACGGCAAATGTGGGAGTTCAAACATCACAAACAAAAATGGTGCCAGTGAATTCAAAGTTGTTCTCATGGGAGACCTATGATGAAGATCTGTCTTCCCTGGATGAAAATTCTGGGATTACAGCGGCTGGACTCTTGGAACAAATAAACGTTACCAGAGATACTAGCGACTATCTATGGTACATTACTAGTGTGGACATTAGTTCATCGGAATCATTTCTTCAGGGAGGACAGAAACCCAGTATCATTGTACAGTCGTCAGGCCATGCCGTTCATGTGTTCATTAATGGGCAATTTTCAGGGTCTGCTTTTGGGACAAGGGAACAAACTAGTTGCAAATTTAATGGGCCAGTCAATCTACACGCTGGAACTAACAAAATTGCTCTTCTCAGCGTAGCTGTTGGATTACCAAATGTCGGCCTTCATTTTGAAACATGGAAGACAGGGATCAACGGTCCAGTTTTGCTTCAGGGTCTTGACCAGGGAACCAAAGATTTAACGTGGCAACAATGGTCTTACCAGATCGGGCTTAAAGGAGAGGCTATGAATTTGGTATCTCCTAATGGGGTCTCATCTGTTGATTGGGTACAAGGGTCACTAGCTTCCCAGAGTCAGCAACAACTTGAATGGCACAAGGCGTATTTTGACGCACCAGAAGGAGATGAAGCATTGGCCTTGGACATGGGCAGCATGGGAAAGGGTCAAGTGTGGATTAACGGTGAGAGCATTGGAAGGTATTGGCTGGCTTATGCAAAAGGTGACTGCAAATCTTGCTCCTATTCTGGCACCTACCGGCCTGATAATTGCCAAGTTGGCTGTGGAGAACCCACCCAACGATGGTATCACGTTCCCAGATCCTGGTTAAAGCCAACCAACAATTTGATAGTTGTTTTTGAAGAATTAGGTGGGAATCCCGGGAAAATATCTCTTGTAAAGAGAATCTAG 2193 0.4446 MESIQKISTSKLLILFFTTLFLYSELTQCSVTYDRKAIIINGQRKILISGSIHYPRSTPQMWENLIQKAKDGGLDVIDTYVFWNVHEPSPGKYNFEGRYDLVQFIKTVQKAGLYVHLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNGPFKAAMGGFTQKIVQMMKNEKLYQSQGGPIILSQIENEYGPEGRELGGAGRAYINWAATMAVKLDTGVPWVMCKEDDAPDPVINACNGFYCDYFSPNKPYKPTLWTESWSGWFTEFGGPNHQRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPMDEYGLIREPKYSHLKELHKAIKQCEPALVSSDPTTTSLGTYQQAHVFSSGSGACAAFLANYNTKSSARVTFNNNHYDLPPWSISILPDCRNVVFNTANVGVQTSQTKMVPVNSKLFSWETYDEDLSSLDENSGITAAGLLEQINVTRDTSDYLWYITSVDISSSESFLQGGQKPSIIVQSSGHAVHVFINGQFSGSAFGTREQTSCKFNGPVNLHAGTNKIALLSVAVGLPNVGLHFETWKTGINGPVLLQGLDQGTKDLTWQQWSYQIGLKGEAMNLVSPNGVSSVDWVQGSLASQSQQQLEWHKAYFDAPEGDEALALDMGSMGKGQVWINGESIGRYWLAYAKGDCKSCSYSGTYRPDNCQVGCGEPTQRWYHVPRSWLKPTNNLIVVFEELGGNPGKISLVKRI 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00122 730 SUPERFAMILY Galactose-binding domain-like 585 725 IPR008979 -
Accr3g00122 730 FunFam Beta-galactosidase 26 346 - -
Accr3g00122 730 FunFam Beta-galactosidase 295 423 - -
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 649 665 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 PRINTS Glycosyl hydrolase family 35 signature 622 636 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 SUPERFAMILY (Trans)glycosidases 28 347 IPR017853 -
Accr3g00122 730 PANTHER BETA-GALACTOSIDASE RELATED 24 728 IPR001944 GO:0004553|GO:0005975
Accr3g00122 730 Pfam Glycosyl hydrolases family 35 38 342 IPR031330 -
Accr3g00122 730 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Accr3g00122 730 FunFam Beta-galactosidase 449 586 - -
Accr3g00122 730 Pfam Beta-sandwich domain in beta galactosidase 350 421 IPR041392 -
Accr3g00122 730 FunFam Beta-galactosidase 594 730 - -
Accr3g00122 730 Gene3D Glycosidases 24 347 - -
Accr3g00122 730 Gene3D - 585 730 - -
Accr3g00122 730 SUPERFAMILY Galactose-binding domain-like 405 576 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00122 Accr-Chr3 1513180 1517435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00122 1 729 Glycoside Hydrolase AT4G36360 72.777 0.0 1165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00122 - - qsa:O6P43_016222 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00122 3 1513180 1517435 Accr4g01159 4 11013821 11017815 CCT
Accr3g00122 3 1513180 1517435 Accr3g00122 3 1513180 1517435 ECH