Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00118 ATGGCTGCTCTAATTTCTCCGCCATTTCCAGCTTCATTTTCTATCGTTCGCTTCCGTGAAACTTCATTGTTTTCCACTCGCTTGCTTCCTTCGAGGAATCTTCAACAGAGATGCAATTATGGATGGTGCGCGGTTAAGTGCAGACTCCTCAGCGTCAGTCTAGCTCCTTCATCAAGTCCTCCGACAGTGATCAATGAACCTCACAAGTATTTTGATCAGGCTATCATCACAGTTCGTTCGGGTGATGGAGGCCATGGAGCTATACTTAGCATGCCCGGCCAGAGAAGTAATAGTTCACAAGGAAGACCTGAAAAGCGGAAGACAAGGAAAAAAAACTCCTATAGAAGAGACTTTGATGGGTCGCTTATCCTACCTATGGGTGGGCATGGAGGGGATGTGGTCATTTATGCGGACGAGGAAAAAGATTCATTATTGGAATTCCACAGCAAAAGTCGCTATAATGCAAAGCGCGGTGGCAATGTCGATACAATGGGTATTTTGACCTCACAATTGCATGATGAACTTGCTGCTCCAACTCTGCGCATTCCTGTGCCTGTAGGTACTGTTGTAAAACGCAAGAGAGGGAAATTGCTGGCTGACCTGGCACAACCAGGTGATGAAGTTCTTGTTGCAAGGGGTGGACAAGGAGGGATTAGCTTGTTAGATCTGCCACAGCATGAAAGGAAGAAGATGATGGCATTGACAACAAATGTGTTGAGAGATGACACTGATAAGGTTTTAGTTCATGGTCAACCAGGTGAGGAAGTTAGCTTAGAGTTGATCCTACGAGTTGTGGCTGATGTTGGCCTAGTTGGACTTCCAAATGCTGGGAAATCAACACTACTGGCAGCCATTACACTAGCAAAACCTGATATTGCTGACTATCCTTTTACAACATTAATGCCAAACCTTGGACGACTGGGTGGTGACCCCAGCTTGGGAGCAGGAATGTTTTCATCTGAAGCTACATTAGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGAAATTTCTTGAGGCACCTCAGGAGGACCCAGCTTCTGGTCCATGTTGTTGATGCAGCCACTGAGAACCCCATCAATGACTATAGAACTGTCAGGGAAGAGTTGCGCATGTATAACCCCGAATACCTTGACCGACCTTACATTGTGATTTTAAACAAGATTGACCTTCCAGAGGCAAAGGACAGGCTTCCATCATTGACTGAAGAAATACTGAGAATTGGGAGCGTTGGTACACCTTCTGAAGTAAAGCTAAACTCTGAAGCTCCAGATCAGCCATTATCCAGTGAAGTTGTCATCAAGGAAAAGAAACTGGAGGATTATTCCCCACCCCTGTCCGTTGTGGGTGTTAGTGTTCTGAGGGGCATCAGGATAGATGACATGTTAAAGGAGATAAGGAAAGCTTTAAGGAAGTGTATGGATCCCACTGAAGTATCCTCGGCTTTCAATTCACCCTCAGAGACTGGCAAGTGA 1494 0.4572 MAALISPPFPASFSIVRFRETSLFSTRLLPSRNLQQRCNYGWCAVKCRLLSVSLAPSSSPPTVINEPHKYFDQAIITVRSGDGGHGAILSMPGQRSNSSQGRPEKRKTRKKNSYRRDFDGSLILPMGGHGGDVVIYADEEKDSLLEFHSKSRYNAKRGGNVDTMGILTSQLHDELAAPTLRIPVPVGTVVKRKRGKLLADLAQPGDEVLVARGGQGGISLLDLPQHERKKMMALTTNVLRDDTDKVLVHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTQLLVHVVDAATENPINDYRTVREELRMYNPEYLDRPYIVILNKIDLPEAKDRLPSLTEEILRIGSVGTPSEVKLNSEAPDQPLSSEVVIKEKKLEDYSPPLSVVGVSVLRGIRIDDMLKEIRKALRKCMDPTEVSSAFNSPSETGK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00118 497 ProSiteProfiles Obg domain profile. 68 265 IPR006169 -
Accr3g00118 497 Pfam GTP1/OBG 127 263 IPR006169 -
Accr3g00118 497 SUPERFAMILY Obg GTP-binding protein N-terminal domain 70 232 IPR036726 -
Accr3g00118 497 CDD Obg 266 404 IPR031167 GO:0005525
Accr3g00118 497 ProSitePatterns GTP1/OBG family signature. 326 339 IPR006074 GO:0005525
Accr3g00118 497 Gene3D - 265 484 IPR027417 -
Accr3g00118 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 483 IPR027417 -
Accr3g00118 497 Gene3D GTP1/OBG domain 69 264 IPR036726 -
Accr3g00118 497 MobiDBLite consensus disorder prediction 86 114 - -
Accr3g00118 497 Pfam 50S ribosome-binding GTPase 267 394 IPR006073 GO:0005525
Accr3g00118 497 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 66 474 IPR045086 GO:0003924|GO:0005525
Accr3g00118 497 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 266 477 IPR031167 GO:0005525
Accr3g00118 497 PRINTS GTP1/OBG GTP-binding protein family signature 324 339 IPR006073 GO:0005525
Accr3g00118 497 PRINTS GTP1/OBG GTP-binding protein family signature 341 359 IPR006073 GO:0005525
Accr3g00118 497 PRINTS GTP1/OBG GTP-binding protein family signature 289 307 IPR006073 GO:0005525
Accr3g00118 497 PRINTS GTP1/OBG GTP-binding protein family signature 268 288 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00118 Accr-Chr3 1492548 1496750 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00118 - - qsa:O6P43_016227 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00118 3 1492548 1496750 Accr3g00118 3 1492548 1496750 ECH