Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00116 ATGGCTGAATCATCCTCCGCCGCCCCCAAGAGAATGTGGTGCTCCGTCCCGGAGCGCCTCCAGCTCCATGGTGCCATGTTGGCCTTGCAGTTTGGTTACGCCGGCTTCCACGTCGTCTCTAGAGCTGCCCTTAACATGGGCGTTAGCAAGCTTGTTTTCCCTGTCTACCGTAACATCATCGCTCTCCTTCTCCTCCTCCCCTTCGCTTACTTCCTTGAAAAGAAGGATAGGCCTGGGCTTACTCTTAACTTTCTTCTACAGTTCTTTCTTCTGGCGCTTGTCGGGATTACAGCGAACCAAGGGTTCTACTTACTTGGGTTGGACAACACGTCGCCGACCTTCGCATCCGCTATCCAGAACTCAGTCCCGGCCATCACCTTTCTGATGGCAGCCATACTGAGGATAGAGCAAGTGACGGTGAACCGAAAAGACGGCGTGGCCAAGGTGATCGGAACCTTCTTCTGTGTTGCCGGCGCCACCGTGATCACCCTATACAAAGGTCCCACCATATACAGCCCATCTCCGCCACTACACAGCAGCGCCACATCCACATTGACGCCGCTATTTCCCTCACTGGGAGACGCAAAGGGTAAAAACTGGACCCTGGGCTGTATCTTCCTCATCGGACATTGCTTGTCGTGGTCTGGTTGGCTAGTCCTGCAGGCACCACTTCTCAAGAAGTACCCCGCTCGCCTTTCTGTCACATCCTTCACTTGCTTCTTTGGACTCATTCAGTTCCTCGTTATTGCTCTCATCTTCGAAAGAGACTCCCAGGCTTGGGTTTTTCAGTCTGGTGGAGAAGTTTTCACCATCTTATATGCGGGAGTGGTGGCATCAGGAATAGCCTTCGCGGTACAGATATGGTGCATTGACAGAGGTGGCCCAGTGTTCGTGGCGGTGTATCAGCCTGTTCAAACTCTCGTTGTCGCTATTATGGCTTCCCTCGCTTTAGGCGAAGAGTTCTACTTGGGCGGGATCATAGGGGCAATCATGATCGTGGTAGGGTTATACTTGGTGCTGTGGGGTAAAAGCGAAGAAAAGAAGTTTGCAAAGGAACAGCTTGCGATTGCGTCCACGGTGGAGCAAGGTGGCGCCACCAGGGCAGCAAGCCAGGCCAAGGCCTCACTTACTCAGCCACTTCTTCCTTCATCAACGGAAAATGTCTGA 1167 0.5304 MAESSSAAPKRMWCSVPERLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKDRPGLTLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVTVNRKDGVAKVIGTFFCVAGATVITLYKGPTIYSPSPPLHSSATSTLTPLFPSLGDAKGKNWTLGCIFLIGHCLSWSGWLVLQAPLLKKYPARLSVTSFTCFFGLIQFLVIALIFERDSQAWVFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAIMIVVGLYLVLWGKSEEKKFAKEQLAIASTVEQGGATRAASQAKASLTQPLLPSSTENV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00116 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 344 - -
Accr3g00116 388 PANTHER WAT1-RELATED PROTEIN 24 352 IPR030184 GO:0016020|GO:0022857
Accr3g00116 388 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020
Accr3g00116 388 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020
Accr3g00116 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00116 Accr-Chr3 1478699 1480683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00116 1 388 Nodulin-like Gene Family AT1G75500 74.169 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00116 - - gmx:100798686 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00116 3 1478699 1480683 Accr3g00116 3 1478699 1480683 ECH