Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00114 ATGGCGGATGGTGGTTGTTGGCCGACGATGGATCTGCTTCGTTCTGAGCCAATGCAACTTGTGCAACTTATCATTCCAACTGAATCAGCTCACCGAGCTATCTCTTACCTTGGAGATCTCGGCCTTTTCCAGTTCAAAGATCTAAATGCAGAGAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGGTGTGGGGAAATGGCACGTAAGCTTCGGTTCTTTAGAGAACAAATGACAAAGGCTGGCATAGCACCCTCAAGAAAGTCCGCAGAAGAAACTGAAGTTGATTTGGATAATTTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTGGAGATTAATGCGAATAATGAGGAGTTGCAACACACCTACCGTGAGCTATTAGAATATGAACTTGTTCTGCAAAAGGCTGGTGAATTTTTCTCTTTAGCTAAAAATAGTGCTAAAGCTCACCAAAGAGAGCTTGAAGTCAAAACCACTTTTGAAGGGTCTATTGACAATCCATTATTATTGGAAAAGGAGTTGCCAACAGATCTACCAAAGCAGCTTAAGCTGGGGTTCATCAGTGGTCTTGTTCCTAGAGAAAAATCAATGGCATTTGAGAGAATACTATTTCGTGCTACAAGGGGTAATATGTTTCTAAAGCAAGTTGCGGTTGAGAATCCTGTTCTTGATCCTTTGTCAGCAGAGAAGATTTATAAAAATGTATTTGTAATATTTTATTCTGGAGAGAGAGCAAAGAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCATTCACTGATGATCTGGGTAAGCAATTTCAGATGACTACAGAGGTGTCTGGAAGACTTTCTGAATTAAAGACTACCATTGAAGTTGGGTTGTTGCACCGCAGTACTCTTTTGCAGACAATTGGTTTTTACTTCGAGCAGCGGAGCCTTCTGGTGAAGAAACAAAAATCCATTTTCCACACTCTAAATATGCTTAGCATAGATGTAACAAAGAAATGTCTTGTAGCAGAAGGTTGGTCTCCTGTTTTTGCAACCAATAAGAGTCAAGTTGCATTGCACCGGGCAACTATGGACAGTAACTCACAAGTTGGGGTGATATTTCAAGTCTTACCAACAAAGGAATCACCACCTACATACTTCCAAACGAATAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGAGTTGCCAAGTATCGGGAGGCAAACCCTGGTGTATATACAATTATCACCTTTCCATTCCTCTTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGCCTATTACTAGCAACTTTATATTTCATAATTAGAGAGAAGAAATTTTCTACTCAGAAACTTGGAGACATAATAGAAATGACTTTTGGTGGTCGCTATGTTATTATGATGATGGCACTATTCTCAATATACACAGGACTGATATATAATGAGTTTTTCTCTGTCCCATTTGAACTATTTGGGCGATCTTCCTATGGATGCCGTGATCTTTCATGCAGGGATGCAACCACAGCAGGCTTAATAAAGGTGCGTGGCACTTATCCATTTGGCGTGGATCCTAAATGGCATGGAACACGTAGTGAGTTGCCATTTCTTAACTCGTTGAAAATGAAGATGTCAATCCTATTGGGAGTAGCCCAGATGAATCTTGGAATTATATTAAGCTACTACAATGCCAAGTACTTTGGGAATGACATAAATATCTGGTACCAGTTTGTTCCCCAAATGTTATTCTTAAACAGCTTGTTCGGCTACCTTTCACTCCTCGTGATCGTTAAATGGTGCACAGGATCACAAGCTGACTTGTATCATGTGATGATATACATGTTCTTAAGTCCGACCGATGATCTGGGTGAAAACCAGCTCTTTTTTGGCCAAAAGTTCCTTCAACTTGTGTTACTATTGTTGGCACTTGTTGCTGTACCGTGGATGTTGTTTCCAAAGCCTTATCTCCTCAAGAAGCAGCATCAAGAAAGGCATCAAGGTCAATCGTACTCTTTGCTTTACAGCAGCGACGACCCTCTTGAAGCCGAGCCACAAATTAATCCCCACGGTCATGATGAGTTTGAGTTCAGCGAGGTTTTTGTACACCAACTTATTCATACAATAGAATTTGTGCTTGGGGCAGTGTCTAATACAGCTTCATACCTACGATTATGGGCTCTCAGTCTGGCACATTCAGAGTTGTCAAGTGTGTTCTATGACAAAGTCCTTCTTCTGGCCTGGGGGTTCAACAACATCATTGTTCTGATCGTTGGCATTATTGTTTTCATAAGCGCCACTGTTGGTGTGCTGCTGGTTATGGAAACTCTCAGTGCTTTCTTGCATGCATTGAGGCTTCACTGGGTGGAGTTCCAGAATAAGTTTTATGAGGGAGATGGTTACAAGTTCAGCCCATTTTCATTTGCTCTACTTAATGAAGAGGATGAAATATAG 2457 0.4074 MADGGCWPTMDLLRSEPMQLVQLIIPTESAHRAISYLGDLGLFQFKDLNAEKSPFQRTYAAQIKRCGEMARKLRFFREQMTKAGIAPSRKSAEETEVDLDNLEVKLAELEAELLEINANNEELQHTYRELLEYELVLQKAGEFFSLAKNSAKAHQRELEVKTTFEGSIDNPLLLEKELPTDLPKQLKLGFISGLVPREKSMAFERILFRATRGNMFLKQVAVENPVLDPLSAEKIYKNVFVIFYSGERAKSKILKICDAFGANRYPFTDDLGKQFQMTTEVSGRLSELKTTIEVGLLHRSTLLQTIGFYFEQRSLLVKKQKSIFHTLNMLSIDVTKKCLVAEGWSPVFATNKSQVALHRATMDSNSQVGVIFQVLPTKESPPTYFQTNKFTSAFQEIVDAYGVAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSTQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSSYGCRDLSCRDATTAGLIKVRGTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYYNAKYFGNDINIWYQFVPQMLFLNSLFGYLSLLVIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFFGQKFLQLVLLLLALVAVPWMLFPKPYLLKKQHQERHQGQSYSLLYSSDDPLEAEPQINPHGHDEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNIIVLIVGIIVFISATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFALLNEEDEI 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00114 818 Coils Coil 92 126 - -
Accr3g00114 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
Accr3g00114 818 PANTHER VACUOLAR PROTON ATPASES 12 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Accr3g00114 818 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00114 Accr-Chr3 1432569 1439746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00114 10 817 Primary Pumps ATPases(2) AT2G21410 74.876 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00114 K02154 - qsa:O6P43_018635 1314.29