Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00102 ATGACTTTACTTCCTCTCTTAATCCCTTTCCTCTTATCATCGCTTCTACTCTCCACCGAAGCCGCCGGTGGCCGCTGGCAGCTTCTCCAAAATAGCATCGGCATTGTAGCCATGCACATGCAGTTATTACACAACGACCGTGTTGTCATCTTCGACCGCACCGATTTCGGCTTCTCCAATCTATCCTTGCCTTTTGACAAATGCCGCCGCAACCCAAACGAGCAGGTTGTTAAGGTGGACTGCACTGCTCACTCCATCGAATACGATGTTCCCTCCAATACTTTCCGCCCACTATTTGTGCAGACTGATGTTTGGTGCTCCTCTGGTTCCGTCATCCCCGACGGCAGTCTCGTTCAGACCGGCGGCTTCAACGACGGTGAACGTGCTGTCAGGGTGTTCACTCCCTGCCCCACCTGTGACTGGCAAGAACAAAATAATTATGCACTCGCAGCTCGTAGGTGGTATGCCACTAATCACATTCTGCCGGACGGACGCCAGATTATCGTAGGCGGCAGAAGGGCATTTACCTATGAATTTTACCCCAAAACATCTGCAGCCAAAAATGCTTATAGCTTACCCTTTCTAGTGCAGACCAACGACCCCGGTACTGAGAACAACTTGTACCCCTTCGTTTTTTTGAATGTGGACGGCAATTTGTTCATCTTCGCCAATAATCGAGCCATCTTGTTGGATTACACGAAGAACAGAGTTGTGAAGACATTTCCACAAATACCTGGAGGAGATCCGAGGTGTTATCCGAGTACTGGATCGGCGGTCTTGTTACCTTTGAGGAATTTGCGAGAGGCATCGATCGAAGCAGAGGTTTTGATTTGTGGCGGAGCCCCAAAAGGCTCTTTTAAGCAGGCCAGCCAGAGCAATAAATTCCTTGGAGCATTGAATACCTGCGCTCGGATAAAAATAACCGACCCTGACCCGCAGTGGTTCCCTGAGAATATGCCCGGAGGCAGAGTCATGAGCGACATGCTCATTCTTCCAAACGGCAACGTTTTGATTATCAATGGAGCAGCCATGGGCACGGCTGGATGGGAGTTGGGGCGGAACCCGGTGTTGAACCCGCTTATATACAAACCGAATAGCCCAATCGGGTCTCGGTTCGTGTTGCAGAACCCGTCCGATATTCCGCGAGTTTACCACTCGACCGCAGCTTTGGTTCGGGACGGTCGAGTGCTTGTGGGAGGTAGCAATCCCCACACATATTATAATTTCACAAAAGTATTATTTCCAACGGAGCTGAGGTTAGAAGCGTATTCTCCGTGGTATTTGGAGGCAGAGTTTTCAAGTGTGCGGCCCGAGATACTGTCGCCTGTTTCTCAGACCAAGGTCATGCATGGGGGCAAGTTGGTGGTGAGATTCCAAGTGAATGCCATATTGGCTCAAAGTTCGGTGTCGGTAACGATGTTGGCGCCACCTTTTAACACTCACTCTTTCTCTATGAACCAGAGGCTGTTGGTGTTGGACGTTATTCAAGTATCCAACCTCGGAAATTTGACGTACGGGGTTGAGGTTGCCACCCCCGGTTCGTCTGTCCTGGCACCACCCGGTTTCTATCTCCTTTTTGTGGTTCATCAAGAAATTCCCAGCCAGGGTATTTGGCTCCAAATACTATCAAATACCACCCTATAA 1644 0.4988 MTLLPLLIPFLLSSLLLSTEAAGGRWQLLQNSIGIVAMHMQLLHNDRVVIFDRTDFGFSNLSLPFDKCRRNPNEQVVKVDCTAHSIEYDVPSNTFRPLFVQTDVWCSSGSVIPDGSLVQTGGFNDGERAVRVFTPCPTCDWQEQNNYALAARRWYATNHILPDGRQIIVGGRRAFTYEFYPKTSAAKNAYSLPFLVQTNDPGTENNLYPFVFLNVDGNLFIFANNRAILLDYTKNRVVKTFPQIPGGDPRCYPSTGSAVLLPLRNLREASIEAEVLICGGAPKGSFKQASQSNKFLGALNTCARIKITDPDPQWFPENMPGGRVMSDMLILPNGNVLIINGAAMGTAGWELGRNPVLNPLIYKPNSPIGSRFVLQNPSDIPRVYHSTAALVRDGRVLVGGSNPHTYYNFTKVLFPTELRLEAYSPWYLEAEFSSVRPEILSPVSQTKVMHGGKLVVRFQVNAILAQSSVSVTMLAPPFNTHSFSMNQRLLVLDVIQVSNLGNLTYGVEVATPGSSVLAPPGFYLLFVVHQEIPSQGIWLQILSNTTL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00102 547 CDD E_set_GO_C 432 541 IPR015202 -
Accr3g00102 547 Pfam Galactose oxidase-like, Early set domain 436 541 IPR015202 -
Accr3g00102 547 Gene3D - 20 434 IPR037293 -
Accr3g00102 547 PANTHER SECRETED PROTEIN-RELATED 18 541 - -
Accr3g00102 547 Pfam Glyoxal oxidase N-terminus 38 280 IPR009880 -
Accr3g00102 547 SUPERFAMILY Galactose oxidase, central domain 85 429 IPR011043 -
Accr3g00102 547 FunFam Aldehyde oxidase GLOX 20 434 - -
Accr3g00102 547 SUPERFAMILY E set domains 432 541 IPR014756 -
Accr3g00102 547 Gene3D Immunoglobulins 435 546 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00102 Accr-Chr3 1300087 1301730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00102 - - gmx:100784385 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01175 4 11178246 11179883 Accr3g00102 3 1300087 1301730 CCT
Accr3g00102 3 1300087 1301730 Accr3g00102 3 1300087 1301730 ECH