Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00101 ATGGAAGGTAATCAAGGAGTCGACCCGGCCAGTACTGGTACTGCTACTGGTATGCAACGAATCAGTTCCACATTTGTTTCCTCCTCAGGTGCCACTCCGAGGCCACAAAACCGATTCAGTGCTCCCGTTCCCAATTTCAGTGCCTCTCAAATGGGCGCTTCTGCGTTTCTGATGCAACAAAACTTGACTCCTGAGAATCTGAAACCTGGTATACCTCCATCTCACCCTAATATCCCATCTTCATCGCATTATTCCCAAATTTCAGAGTTCCAATCGGCTCCCCCCCAATTACGTTCTCCGAATATGAGACCGCGCTCTTCCCATTCACGCTCTTTGTCTCAACAATCATTTTTTTCCCTCGATAGCCTGCCTCCATTGAGTCCTTCACTTTATTGTGAGCCCTCCGCGACCTCTCTTTCCAACTCGATTTCGACAGATGTGGCTATGGAAGAAAGTGTGGTTAACTCTCGTGGCCCTGGCATTTCTATGCCCATCAATAGGGATCACGCCTTTCAAGCTGGTCCTAGTGTTCTTCCCCGCAAAGGGCACAGGCGCTCCAGCAGTGATACTCCATTAGGAATCTCTGCCTTCATTCAATCCCCTCCTCCTCAGTTAGTTCCCTCACCTTGGATGAATTTGGACAATTCAATTTCTAGAGGAGAAAGATCAGGATTGGAGAAGCCAATTCAGTTGGTAATAAAGGAGCCAAAAAAGGACGAGGGTCATGTTGATTGGTACGATGCAAAACCTATGGTTGAGAGGAAAGATGATGTGATGGATGATTTAATTAGCGTGTATATGAATTTGGATAACATTGATGATGTGAACTTATCTGGGGCGGAAGAATCAAAGACTTTTGAAAGCAGTGATAATGAAGTTGTGAGTCTCGTAAGTGGGAAAGCAACCTCTACACAAGAGGCAACATCGAGCTTTGTGGAGGAAAGGAGGGAAGGAATCAAAAGGAGTTCTGATGGGGACATTGCACCAGGTTCCCGACATCGGAGAAGTTTTTCTCTGGATAGTTCTATAGGAAATTTGCATATTGGTGATGAATCACCGAAGCTTCCTCCTTTGGGGAATGGAGCTGGTCAGCGCTCACCTAGCAATTCAGTAGATGGTAAAACACTTGAAATCAACATGGAGTTGAGAAATGGTGAGTTCTCTGAACTAGAGCTGAAAAAAATAATGGAAAATGATAAACTTGCTGAGATTGCTTTGTCAGATCCCAAGCGTGCAAGAAGAATATTGGCTAATCGGCAATCAGCTGCTCGATCCAAGGAGCGGAAGGTGCAGTACATTGCTGAACTGGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTCACCAAATTGCAGAGGGATAACTCACAGCTTAAAAGCGAGAATAGTGAATTGAAATTCAGGCTTCAAGCCATGGAACAACAGTCCCAACTTAAAGATGCTCTGAATGAGACCTTAACTGCTGAAGTCCAGCGTTTGAGGCTTACAGTCACGGAACTTGGTGGAGAGTCTATTCTTGCGGGTTGCATGGCTCGCCAACGTGCTATTAATCATCAAAGGTTCCAATTGCAACAAGAGCAGCCTGGCCAGCTTAAACGATCACAAATGCAAAATCAGCCTCAGGAGGAGGCCCAGACTCAGTCGCGCTAG 1668 0.458 MEGNQGVDPASTGTATGMQRISSTFVSSSGATPRPQNRFSAPVPNFSASQMGASAFLMQQNLTPENLKPGIPPSHPNIPSSSHYSQISEFQSAPPQLRSPNMRPRSSHSRSLSQQSFFSLDSLPPLSPSLYCEPSATSLSNSISTDVAMEESVVNSRGPGISMPINRDHAFQAGPSVLPRKGHRRSSSDTPLGISAFIQSPPPQLVPSPWMNLDNSISRGERSGLEKPIQLVIKEPKKDEGHVDWYDAKPMVERKDDVMDDLISVYMNLDNIDDVNLSGAEESKTFESSDNEVVSLVSGKATSTQEATSSFVEERREGIKRSSDGDIAPGSRHRRSFSLDSSIGNLHIGDESPKLPPLGNGAGQRSPSNSVDGKTLEINMELRNGEFSELELKKIMENDKLAEIALSDPKRARRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTKLQRDNSQLKSENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLTVTELGGESILAGCMARQRAINHQRFQLQQEQPGQLKRSQMQNQPQEEAQTQSR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00101 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 96 551 - -
Accr3g00101 555 MobiDBLite consensus disorder prediction 1 113 - -
Accr3g00101 555 MobiDBLite consensus disorder prediction 310 333 - -
Accr3g00101 555 MobiDBLite consensus disorder prediction 77 113 - -
Accr3g00101 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 408 471 IPR004827 GO:0003700|GO:0006355
Accr3g00101 555 Gene3D - 407 470 - -
Accr3g00101 555 SMART brlzneu 406 470 IPR004827 GO:0003700|GO:0006355
Accr3g00101 555 MobiDBLite consensus disorder prediction 283 372 - -
Accr3g00101 555 Coils Coil 426 446 - -
Accr3g00101 555 Coils Coil 461 481 - -
Accr3g00101 555 CDD bZIP_plant_RF2 411 461 IPR044759 GO:0003700|GO:0006355
Accr3g00101 555 Pfam bZIP transcription factor 410 468 IPR004827 GO:0003700|GO:0006355
Accr3g00101 555 SUPERFAMILY Leucine zipper domain 410 466 IPR046347 GO:0003700|GO:0006355
Accr3g00101 555 MobiDBLite consensus disorder prediction 283 309 - -
Accr3g00101 555 MobiDBLite consensus disorder prediction 526 555 - -
Accr3g00101 555 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00101 Accr-Chr3 1280262 1283372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00101 18 505 bZIP Transcription Factor Family AT4G38900 44.914 4.49e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr3g00101 bZIP_1 7.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00101 - - pcin:129302979 884.789