Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00100 ATGGGAAAATCGATTTCCTGCTTCAAATTAATTACTTGCGGCAGTGATGCAGCGGACGGCAACGACGATTACCAAGTGTCTGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATGCTGTAATCACAGATACGCCTTCTTCAGCAAACAAGGAGAGTTCAGAATGTACTAGTAACAATTTCCAACTATCAACTGAAACAAATACTGCTGAGAAGTGCCATACGACAAATTGCCCTGATGAGAAACCCCCTCTATCATCTGTGGAAAAATCACAATTATCTGAATCAGTAGTTACTGAAACTGAGAGTAAGGTGGATGTCAATCCACCGGAGTCTGTGGTTATCACCATCCAAGCTGCCATCAGAGGGTTCATGGCTCAGGTAGCCTTGCTAAAGCTTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTCGAAGGCATGCTATAGGAACCCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAGCTTCTTGTGCGGGCTCGACATGCTCAGCAGTTGCATCAGGATAAGCAAGGAAAAATTAATGGCTCAGAAATTTTGGGTAACGTAAATCACATGAGCAAGTCAAGTGTGAAGTCCACTTCTGTAGAGAAACTGCTTAGCAATCGGTTCGCTCATCAGCTGTTGAAATCCACGCCCAAACAGAAGCCGATCCATGTCAAATGTGATCCTTCCAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCTTCGTTGGATTCTGCAGAATCTAAAATAGCAAGTTCAGTGGTGGAGCAATCAGACAATGACTCTCGCACTCCTCTGCCTCAATTAGAAACTGGGCTTCAGTCTGAAGTTTTTTGTCAGTCAGATGACTCAAAGCTGACTGTTGAGGACTCTGTTGGGCCTTCAGAGGTTGAAGAGAAAGTGACTACTCATGATACAGGAAACTTAAGCTTTGAAGCAATTCATTCTACATCTCATGCGAAAGATGAATTGGAACAGGCTCAGGGTGAAATGACAATTACTTTTGATGCTAAAGTAACCTCTGAAAAAATTGTTTCTCAGCAAAATATAATTGTGATATCAGATGCAATTGCTCCTCAGGAGCTTAGTTCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGGACAAAAGATCTGTGAAGATTGTGACGCCAGATGCAATTTGTCCTCAGGAGCTTAGTCCTCTTCCTGAGAAACCTGAAATTGACAGTGAACAGGACAAAAGATCTATGAAAATTGTGACGTCAGATGCAATTGCTCCTCAGGAGCTTAGTTCTCTTCCCGAGAAACCTGAAATTGACAGTGAACAGCCCAAAAGATCTATGAAAAGATTTGCCACTGAGCAACTAGAGACTGAGGGAACCAAATTTGGATATGGATCAAGAAAGGTCAGCAATCCTACATTTATTGCTGCACAGTCCAAATTTGAAGAGTCAAGTACTTTGGCAAATTCAGGTAGGTCAAGCAGTTTGTCTAATAAAGATGCAACAGTTGAAGCGCATGGGGACCCTATTTCTGTTGGCACAGACAATGATTTCAGGTCAAAAGATCTCTCATTGGAAAATTCTGGTCCCTTTCCTTCCAGGATCGGTGGCTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACGCTTGATTCACCTGATATATCTGAGGTTGGGGCTACAGAAAACGAACCTGTAGCCAAAGATTTATCTGAAGGGATTTGTAATCCTGACAATATGATAAATCATGAGGTTGAGGCCAATGTTTTTTCTACCACTCCAGCTTGTGACTTGCCTAGCTCTGCACCAGATCAGCCTGAGACTGCCAATGACGAAGATGTCAATGGCAAATCAGTACATTTAGCAGTAGTTGGTTCCAAAGAAGCTCCTAAGTCTGAGGAAAACATGTCTGATCTGCCAAGAGAACGAGCGGAGTCTGCTGTGCATGATCTCAGAGTATCTCCTGAAGCTTCACCCAGAAGCCATATAACTATACCTGAATCTCAAGGAACACCTTCAAGTCAGGTATCAGTGAAACCTAAAGAAAGAAAACCTGAGAAGACTGGATCTGGATTAAAAAATAAACGAAGGCTTCTGTCAGCTGGTAATAGATCACCTGCAAGTGCGACTCCTGATTCAGGATCTAGAGGTAGTAGGGAACAGCTTCCTAAAGATCAGGGGAGTGGGAAGAGGCGCAATTCCTTTGGCTCGGCGAAACCTGATCACATTGATCAAGAATTAAGGGATAATAGTAGCAATAGTTCTCTTCCTCATTTCATGCAAGCCACAGAATCTGCCAGGGCCAAGATTAATGCGAATAATTCTCCACGATCAAGTCCAGATCTGCATGACCGGGAGGTAAACGTTAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGGTATACAGAGTTCTCCACGCATTCAGAGCTCAATTTCTCAGGCACAGCAGGGTACGAAAGGACAAGGTCCACATCCTTCTCATGAGAGGAAGTGGCAGCGGTGA 2565 0.4351 MGKSISCFKLITCGSDAADGNDDYQVSEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSSANKESSECTSNNFQLSTETNTAEKCHTTNCPDEKPPLSSVEKSQLSESVVTETESKVDVNPPESVVITIQAAIRGFMAQVALLKLKNVVKLQAAVRGHLVRRHAIGTLRCVQAIVKLQLLVRARHAQQLHQDKQGKINGSEILGNVNHMSKSSVKSTSVEKLLSNRFAHQLLKSTPKQKPIHVKCDPSKADSAWKWLERWMSVSSLDSAESKIASSVVEQSDNDSRTPLPQLETGLQSEVFCQSDDSKLTVEDSVGPSEVEEKVTTHDTGNLSFEAIHSTSHAKDELEQAQGEMTITFDAKVTSEKIVSQQNIIVISDAIAPQELSSLPEKPEIDSEQDKRSVKIVTPDAICPQELSPLPEKPEIDSEQDKRSMKIVTSDAIAPQELSSLPEKPEIDSEQPKRSMKRFATEQLETEGTKFGYGSRKVSNPTFIAAQSKFEESSTLANSGRSSSLSNKDATVEAHGDPISVGTDNDFRSKDLSLENSGPFPSRIGGSECGTELSISSTLDSPDISEVGATENEPVAKDLSEGICNPDNMINHEVEANVFSTTPACDLPSSAPDQPETANDEDVNGKSVHLAVVGSKEAPKSEENMSDLPRERAESAVHDLRVSPEASPRSHITIPESQGTPSSQVSVKPKERKPEKTGSGLKNKRRLLSAGNRSPASATPDSGSRGSREQLPKDQGSGKRRNSFGSAKPDHIDQELRDNSSNSSLPHFMQATESARAKINANNSPRSSPDLHDREVNVKKRHSLPGASATGIQSSPRIQSSISQAQQGTKGQGPHPSHERKWQR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00100 854 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Accr3g00100 854 MobiDBLite consensus disorder prediction 440 469 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 817 843 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 500 590 - -
Accr3g00100 854 Pfam IQ calmodulin-binding motif 127 140 IPR000048 GO:0005515
Accr3g00100 854 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Accr3g00100 854 MobiDBLite consensus disorder prediction 698 712 - -
Accr3g00100 854 PANTHER IQ-DOMAIN 5-RELATED 1 823 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 611 627 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 559 575 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 720 752 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 611 854 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 453 469 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 768 797 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 680 697 - -
Accr3g00100 854 MobiDBLite consensus disorder prediction 500 520 - -
Accr3g00100 854 SMART iq_5 122 144 IPR000048 GO:0005515
Accr3g00100 854 SMART iq_5 145 166 IPR000048 GO:0005515
Accr3g00100 854 MobiDBLite consensus disorder prediction 650 669 - -
Accr3g00100 854 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Accr3g00100 854 Pfam Protein of unknown function (DUF4005) 759 837 IPR025064 -
Accr3g00100 854 Gene3D - 123 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00100 Accr-Chr3 1264657 1270183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00100 438 854 IQD Protein Family AT1G19870 37.412 1.49e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00100 - - gsj:114408593 927.161