Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00098 ATGCTAAGTATGCGTTGTTTACACAAATCGAAAAGGGTTTCTTGGGCCTCAGATTTAGATCTTTGTCAGGTTAGATTATTTTTATCAGAGGATTGTCCTTCGCTAGTTGGGTTAAATGCTCAAGATCACCTCCAAGCAAAGACATCATTACTGTTGCATCCAGGAGGAGCAGGTTATGATCACATTCTACCCCCTGGCTTTGAAGGAACTCAATCCTCAAGTCAGACGCAGATTAAGCTCTCCCAGATTCCAGTGATTAAATGGACCAATCCACTTAAGATTGTGCTTGATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCGAAGAGGTAGAGGATCAAAATCAGAGAGAGATGAAAGTACTTGAAGCCATTTATCCCCGCCCATCTTCGATACCTCCAAACCCCTCTGTCTCGGTGGATGTAGAAGACTCCCTTTGCAATGATGACCATACGGCTTTGATACCAATTACACCAATTGAAGATGAGGATCCCACAGTAGACGCATCATCTGGAGTCCCACCTAGTTCACAGAATCTTTTATTTGTTGCTGGAGTACCGGGCGGTCCTAATTCTCCTCAAATTACGCAATTACCCCATGTAGTAGAATCTGAGTCTGTTGAAGCATCTGTAGCTTTAAAGCATATCATGAAGAACAGTGAACATGGAATTTTGATTGACCATGAATTACTGAATAAAATTCTCAGCAACCCAGAAGTGATTGAAAAGTTGGTTGGAGATCATGGAAATACAAATAACTCACAACATACATTCAGCGCTAGCTCATCCTTGGTCACTTCACGACCCCCCATTACTCTGAATCAAACTGAAACCAGTACACCTTCATTTGGTGGCTTTTCAGCTAGCCCTTCCTATCCTGCTCAGATGGTCGGTGGAGTGGGACCTGTTGCTCCTCAACGGGTCCCTCTGCCTGTAGGTAGTCTTGGAGCTCCTCCAGCAAAGGATGTGAACTACTATAAGAGCTTAATTCAGCAACATGGAGGAGAAAAACAAGAGGCTCTTCCTTATATGAACAACATTAGGCAACCCGTAGGAAACCAGGAGACAACACACAATTCTAGATCAAGGGAACCAAAACCCAAGATAATGAAGCCTTGTATCTATTTCAACAGTCCAAAAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGATGTGGCGTTTCAGCCTCGTGGTAGTGCTGTGCCAGGCGTACAAAGTTCAAAGAGAACCAAAATGGATAGCGAGATTAGTAGTTGGTTAGACTCTTGA 1275 0.4392 MLSMRCLHKSKRVSWASDLDLCQVRLFLSEDCPSLVGLNAQDHLQAKTSLLLHPGGAGYDHILPPGFEGTQSSSQTQIKLSQIPVIKWTNPLKIVLDLTWQVVAGEESEEVEDQNQREMKVLEAIYPRPSSIPPNPSVSVDVEDSLCNDDHTALIPITPIEDEDPTVDASSGVPPSSQNLLFVAGVPGGPNSPQITQLPHVVESESVEASVALKHIMKNSEHGILIDHELLNKILSNPEVIEKLVGDHGNTNNSQHTFSASSSLVTSRPPITLNQTETSTPSFGGFSASPSYPAQMVGGVGPVAPQRVPLPVGSLGAPPAKDVNYYKSLIQQHGGEKQEALPYMNNIRQPVGNQETTHNSRSREPKPKIMKPCIYFNSPKGCRNGANCAYQHDVAFQPRGSAVPGVQSSKRTKMDSEISSWLDS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00098 424 ProSiteProfiles Zinc finger C3H1-type profile. 367 395 IPR000571 GO:0046872
Accr3g00098 424 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 287 415 - -
Accr3g00098 424 MobiDBLite consensus disorder prediction 402 424 - -
Accr3g00098 424 MobiDBLite consensus disorder prediction 399 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00098 Accr-Chr3 1256786 1260094 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr3g00098 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00098 - - pcin:129303333 669.848