Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00095 ATGGCTTTCGTCGAAGATATGGTTAAAACCGGAGGATTAATTGTTGGGGCTCAATCTCTAGCTGCTGAGATGAAGATGTTGAAAGAAATGCAGGAGCAATCTGGGGTCCGAAAGAGTATAAATTCTGAGTTATGGCATGCTTGCGCTGGCCCACTTGTAAGCTTGCCTCAGCTGGGTAGTCTGGTGTATTACTTCCCTCAGGGACACAGTGAACAGGTGGCGGCTTCCACTAGAAGAACAGCAACTTCACAGATTCCAAACTATCCGAATCTTCAATCTCAGTTGCTTTGCCAAGTTCAAAATGTCGGACTTCATGCAGATAAAGACACGGACGAAATATACGCTCAAATGAGTCTCCAACCATTGAATTCTGAAAAAGATGTCTTCCCTATATCAGACTTTGGGATGAAGCCTAGTAAACATCCAAGTGAATATTTCTGCAAAACTTTGACTGCTAGTGATACAAGCACGCATGGTGGCTTTTCTGTACCTCGCAGGGCTGCAGAAAAGCTCTTTCCTCCATTGGATTATACCATTCAGCCCCCGACACAAGAACTTGTTGTCCGAGACTTACATGATAATACTTGGACATTCCGACATATATACCGAGGCCAGCCGAAGAGACATCTTCTCACAACAGGATGGAGTTTATTTGTTGGTTCAAAGAGGCTCAAAGCTGGTGATGCTGTTCTTTTTATCAGGGACGAGAAATCACAATTGCTGGTTGGTGTTAGGCGTGCAAATCGTCAACAGACAACATTGCCGTCATCTGTCCTTTCTGCCGATAGCATGCATATTGGCGTGCTAGCTGCTGCAGCTCATGCTGCTGCCAATCAGAGTCCGTTTACTATTTTCTACAACCCAAGGGCATGCCCTTCAGAATTTGTTATTCCACTGGTTAAATACAGAAAAGCTGTATATGGTACCCAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGGTATATGGGCACTATAGTAGGTGTCAGTGACTTGGACCCTTTGAGGTGGCCTGGTTCAAAGTGGAGAAATATTCAGGTGGAGTGGGATGAGCCTGGGTGTGGCCATAAGCAGAATAGAGTTAGTGCTTGGGAAATTGAGACTCCTGAAAGTCTTTTTATCTTTCCTTCTTTGACTTCGAGCCTAAAACGACCATTTCAATCTGGATCTTTTGAAAATGAGTGGGGGACTTTGTTAAGAAGGCCTTTTATACAAGTTCCTGAAAATGCAAATTTGGAGCTCCCAAACAGCTTACAAAATCTGTACATGGAACACCTGATGAAGGTTCTTTTTAAACCTCAACTGGTGAACAATCCTGGAGCGTTTTCACCAGTCATGCAGCAAGAATCTACTGCCAAGAGTGATCTCTCACAAGATTTGAAGAAGACGCCAGCGACTGATAGCCAAAAAGCTCATATTGTATGTTCAGGGAGCATGCCTCCAAAAAATCCAGATTACTCTCAATCTCTCCCTGACCAATCTAATGCCTTCAATTTGCATTCCCTGTTGAAAAGTGATCAAACTGGGAAATTGCACCGTCAGCCTAGAATTGAGAATGCTCAATCTTCTGGAGCAGTTTCTGACAAGACAAAATTAGAATCTGTGGACTTAACTGACCATATTTTTGACTGTCCTTCAATAGAAGGATGCAACATGGAAAAAGTGGCGGCCAACCCTATGAACCCACCCGGCCATGCGAGTCAAATGGCAATGCTAAATCAAAACCAGGGTCCATGGCCCGTGCAGCAACAGTTAGAATCAACAATACCTCATTCTCAAATGGTTGATATTCCTCAATCCGATTACGCGCTTTTAAATGGCCTGCTTCCTCAGGCAGACGTTGATGAATGGATGTTGTATTCTTCCTGCCAATCTTTTCCCGGTGTGAGTAGATCAGCTGGGCCTTTGCAAGAACAGTCTACACTTGTCCCACAAGCAGTTAATACTACCCCTTTACCTTCCGTGAGTCAAGAAATGTGGGATCATTATCTCAAAAATTTCAAGTCCTTACCTCAAGCAGACCAGTTAACACCCATCTCACAGCAAGGGTTTCAGAACTTCAATTGTATGTCTAATCCAAATAACCTGAGGGATCTATCAGCTGAGAGCAATACCCAAAGCGGGGTGTATAGCAGTGTCAATGTGGATGCTAGTAACAGTGTAAGTACTATGGTTGATCCTTCTACTTCGAGTACCATTTTGGATGATTTTTGCGTGTTGAAGGATGGGGAGTTCCAGAACCCATCAGAATGCATGGTTGGCAACGTAAGTTCGAGCCAGGACGTCCAGTCTCAGATAACCTCTGCAAGTCTAGCTGAGTCGCACATTTTCCCTCTGCAAGACATAACTGACAACTCTGGTGGTGGTACTTCTTCAAGCCACGTTGATTTTGATGAAAGCAGCTTTCTGCAGAATAACTCGTGGGCGCAAGTTGCTGCACCTGTGCGAACCTACACCAAGGTTCAAAAGGCAGGGTCAGTAGGAAGATCATTAGATGTAACCACTTTTAAGAACTACGAGGAACTGATCTCCGCAATTGAACGGATGTTTGGACTTGAGGGTCTGCTGAACGACACCAAAGGTTCAGGATGGAAATTGGTATATGTTGATTATGAAAACGATGTTCTGCTTGTTGGGGATGATCCTTGGGAGGAATTCGTGGGATGTGTCCGGTGCATCAGGATATTATCTCCGGTGGAAGTGAAACAGATGAGCGAGGAGGGAATGAAGCTTCTAAACAGTGCTGCGGTGCAACAGTTCAATGGAACCATGTCAGGTGGCTGCCCTTAG 2817 0.4459 MAFVEDMVKTGGLIVGAQSLAAEMKMLKEMQEQSGVRKSINSELWHACAGPLVSLPQLGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLQSQLLCQVQNVGLHADKDTDEIYAQMSLQPLNSEKDVFPISDFGMKPSKHPSEYFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDAVLFIRDEKSQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANQSPFTIFYNPRACPSEFVIPLVKYRKAVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGVSDLDPLRWPGSKWRNIQVEWDEPGCGHKQNRVSAWEIETPESLFIFPSLTSSLKRPFQSGSFENEWGTLLRRPFIQVPENANLELPNSLQNLYMEHLMKVLFKPQLVNNPGAFSPVMQQESTAKSDLSQDLKKTPATDSQKAHIVCSGSMPPKNPDYSQSLPDQSNAFNLHSLLKSDQTGKLHRQPRIENAQSSGAVSDKTKLESVDLTDHIFDCPSIEGCNMEKVAANPMNPPGHASQMAMLNQNQGPWPVQQQLESTIPHSQMVDIPQSDYALLNGLLPQADVDEWMLYSSCQSFPGVSRSAGPLQEQSTLVPQAVNTTPLPSVSQEMWDHYLKNFKSLPQADQLTPISQQGFQNFNCMSNPNNLRDLSAESNTQSGVYSSVNVDASNSVSTMVDPSTSSTILDDFCVLKDGEFQNPSECMVGNVSSSQDVQSQITSASLAESHIFPLQDITDNSGGGTSSSHVDFDESSFLQNNSWAQVAAPVRTYTKVQKAGSVGRSLDVTTFKNYEELISAIERMFGLEGLLNDTKGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPVEVKQMSEEGMKLLNSAAVQQFNGTMSGGCP 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00095 938 MobiDBLite consensus disorder prediction 455 481 - -
Accr3g00095 938 SMART B3_2 146 248 IPR003340 GO:0003677
Accr3g00095 938 CDD B3_DNA 145 246 IPR003340 GO:0003677
Accr3g00095 938 Gene3D - 821 914 - -
Accr3g00095 938 Gene3D - 310 382 - -
Accr3g00095 938 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 915 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr3g00095 938 Pfam AUX/IAA family 822 910 IPR033389 -
Accr3g00095 938 SUPERFAMILY DNA-binding pseudobarrel domain 134 275 IPR015300 -
Accr3g00095 938 ProSiteProfiles B3 DNA-binding domain profile. 146 248 IPR003340 GO:0003677
Accr3g00095 938 FunFam Auxin response factor 144 248 - -
Accr3g00095 938 FunFam Auxin response factor 821 914 - -
Accr3g00095 938 SUPERFAMILY CAD & PB1 domains 828 904 - -
Accr3g00095 938 ProSiteProfiles PB1 domain profile. 825 909 IPR000270 GO:0005515
Accr3g00095 938 Pfam B3 DNA binding domain 146 247 IPR003340 GO:0003677
Accr3g00095 938 Gene3D - 144 247 IPR015300 -
Accr3g00095 938 Pfam Auxin response factor 272 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr3g00095 938 MobiDBLite consensus disorder prediction 523 538 - -
Accr3g00095 938 MobiDBLite consensus disorder prediction 516 539 - -
Accr3g00095 938 FunFam Auxin response factor 310 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00095 Accr-Chr3 1241484 1246532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00095 19 934 B3 DNA Binding Superfamily AT1G19850 59.081 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr3g00095 AUX_IAA 2.7e-10 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00095 K14486 - gmx:100813003 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00095 3 1241484 1246532 Accr3g00095 3 1241484 1246532 ECH