Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00068 ATGGTCACTGATTCCTCTGATCATCACTCGCCCACTAGTGCTGGGGATACCGGTAGCCCTAATTTCCCGCGAAATGCCCTGACATCTCCGTGGGCTCAAGTTGTAAGAGGTGGGGAGTGCGAATCTCATTCATCGCCGCCTTCATCATCTTCCTCTTCATCATCACTCACAACATCGGTGTCCGACCAACCACGATTCTCTGATTTTCCTCCGATGGAGGCACCTGCATCGCAGCTGCAGGATAACTCGAATGTTGTTGGTGCAGATAACTCTGACGCTGACGCTTCCGACGCCAATGCAGGTCGTTCTAGGAGGGCCGCTTGGAGCAAGCTTTCTAACGGCGTTGTCGAGGCCGGTCCAGTGATGGGCGCTGTTTCTTGGCCCGCATTATCTAAATCCACGAAGGTTTCGACCAAAATATCAGCCGACTCCACGTCTAAGACTCCCTTTGATGGATCACTCTCCACTTCTCAGGGATCTGGCACTTCACAATCCGCTCAAAAACAACCTACTAATAATGCAAAGCCTAACTCTGCAACAAACTATGCTGTGCATCATAGACAAAGGTCAATGAAACGTGGAGGTAGCAACAGCATTGGGGTTGGTCATGCTCAGAGCAGCTTTTCTAACCCTCCGCCGCCTCCACCCTTTCCTGTATTTCCTATACCGGCTAATAGCTATGGTAATGTGGTGCCGGGGTTTCCAGATCATTCTCCAAGGGAAATCCCTTACAGGAACAATAACTGGGATACAAGGCCACCGGTTGGGGGTTTTGTGCCTGCTGTGAATGATCATTGGAATCCTCCCCGCAGAGGCAATTTTGGGACCCATCAACGGGGGGATGGATCCTATCATGGGGGTAGGCGTGACCAGGACCGTGGAAATCATGCAAACACTAGAGATGCTCAAGTACACCAACAGAGGATGTCTCCTAGGGGATTAGTGAGGCACCCACCTCCTAATACTCCTGCATTTGTTGCCCCTCCGCCCATGGGACCCTTTGCAAACCCCATGGGTTTTCCAGAATTTCATTATTTCCCAACTCTACCACTAGAGCCATTCAGGGGTATGCCGTTCATTACCCATGGTCCTCCTCCTGCGATGTTTCTCCCTGTTGCAGAACCTCTTCTGACAAATAAGATAGTGAACCAAATTGATTATTACTTTAGTGATGCTAATTTAGTCAACGATGAGTTTTTGATATCCAAAATGGATGAACAGGGTTGGGTTCCCATTTCTTTGATAGCAAACTTCCGTCGGGTTCAAAGTTTGACAGACGACAAAAAGCTGATACTGGATTCATTGAGAAATTCTGCAGTTGTGGAAGTACAGGGTGACAAATTGCGGAGGCGTAATGAATGGATGAAGTGGCTTCCCTCATCTCTGCGTCGAGCTGATTCTGGTTCATCATCTCCTGTTGAACCAAGTTGCAGTAACCTGGCAGCTGATTTTCAGAAGATTGCTCTGGGTGAAACTGTTGCAGATAAAGGTAATTCAGACCCTACGTCAGGGGCCCTAGATGGAAGATCTCCGACAGATTCTTCCAGTCAACCTCAATTTCCAAAGGATGATACTACAGGGAACGCCAATTGA 1593 0.4871 MVTDSSDHHSPTSAGDTGSPNFPRNALTSPWAQVVRGGECESHSSPPSSSSSSSSLTTSVSDQPRFSDFPPMEAPASQLQDNSNVVGADNSDADASDANAGRSRRAAWSKLSNGVVEAGPVMGAVSWPALSKSTKVSTKISADSTSKTPFDGSLSTSQGSGTSQSAQKQPTNNAKPNSATNYAVHHRQRSMKRGGSNSIGVGHAQSSFSNPPPPPPFPVFPIPANSYGNVVPGFPDHSPREIPYRNNNWDTRPPVGGFVPAVNDHWNPPRRGNFGTHQRGDGSYHGGRRDQDRGNHANTRDAQVHQQRMSPRGLVRHPPPNTPAFVAPPPMGPFANPMGFPEFHYFPTLPLEPFRGMPFITHGPPPAMFLPVAEPLLTNKIVNQIDYYFSDANLVNDEFLISKMDEQGWVPISLIANFRRVQSLTDDKKLILDSLRNSAVVEVQGDKLRRRNEWMKWLPSSLRRADSGSSSPVEPSCSNLAADFQKIALGETVADKGNSDPTSGALDGRSPTDSSSQPQFPKDDTTGNAN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00068 530 MobiDBLite consensus disorder prediction 1 214 - -
Accr3g00068 530 Gene3D - 371 460 IPR036388 -
Accr3g00068 530 Pfam La domain 381 437 IPR006630 -
Accr3g00068 530 ProSiteProfiles La-type HTH domain profile. 371 460 IPR006630 -
Accr3g00068 530 MobiDBLite consensus disorder prediction 193 207 - -
Accr3g00068 530 MobiDBLite consensus disorder prediction 496 530 - -
Accr3g00068 530 MobiDBLite consensus disorder prediction 282 299 - -
Accr3g00068 530 CDD LAM 379 451 - -
Accr3g00068 530 SUPERFAMILY "Winged helix" DNA-binding domain 369 459 IPR036390 -
Accr3g00068 530 MobiDBLite consensus disorder prediction 266 320 - -
Accr3g00068 530 MobiDBLite consensus disorder prediction 42 65 - -
Accr3g00068 530 PANTHER LUPUS LA PROTEIN-RELATED 124 471 IPR045180 -
Accr3g00068 530 MobiDBLite consensus disorder prediction 491 530 - -
Accr3g00068 530 MobiDBLite consensus disorder prediction 1 28 - -
Accr3g00068 530 MobiDBLite consensus disorder prediction 130 185 - -
Accr3g00068 530 SMART la 375 453 IPR006630 -
Accr3g00068 530 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00068 Accr-Chr3 879890 883803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00068 K18757 - gmx:100785504 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00068 3 879890 883803 Accr3g00068 3 879890 883803 ECH