Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00067 ATGGACAAGACTACGCCCAATCACACACAGACTGTTTCTGGATGGGCTGCTCACGATTCTTCTGGCAAAATTACCCCCTTCACTTTTCAACGACGGGAGAATGGCGCTAACGATGTCACCATACAGATCTTGTACTGTGGGATCTGCCACACTGACCTTCACTATGCTAAAAACGACTGGGGCATCACTATGTATCCAGTAGTTCCCGGGCACGAGATCGTAGGGGTGATAACGAAGGTGGGAAGCAACGTGAAGGGGTTTAAGGAAGGAGACAGAGCAGGGGTGGGGTGCCTGGCAGCCACCTGCCTCGACTGTGAATACTGCAACACTCATCAGGAGAACTACTGCCAACAATTACAGTTCACTTACAACGGCCTCTTCTGGGACGGCACCATCACCTACGGTGGCTACTCCCACATGATAGTGGCCGATTACAGGTATGTGGTACACATACCGGAGAAGCTGAACATGGAAGGGGCGGCGCCGCTGCTGTGCGCCGGGATAACGGTGTTCAGCCCGATGAAGGATCACGGATTGGTGGAGAGCGGGGGCAAGAGGATCGGAGTGGTGGGGCTGGGGGGGTTGGGGCACATGGCGGTGAAATTCGGGAAGGCGTTTGGGCACCACGTGACGGTGATAAGTAGGTCCGCGGACAAGGAGTGGGAGGCAAAGCACAGGCTGGGAGCCGATGAGTTCATAGTGAGCAGCGAGCAGAAGCAAATGGAGGGAGGGAAGAAGACGATGGATTTCATATTGGATACGGTGTCGGGGCAGCATTCTCTGCTGCCTCTGCTGGAACTACTCAAGATCAACGGCACTCTGTTCATCGTGGGCGCCCCCAGTCAACCGCTGGAGCTGCCGGCTTTCCCTCTGATATTCGGAAAAAGGTCGGTGAAAGGAGGCATCATCGGAGGCATCAAGGAGACGCAGGAAATGCTGTACCTGTGTGGGAAGCACAACATAACGTGCGACACAGAGTTGATAAGGCCGGATCAAATCAACGACGCCATGCACCGCCTCGCCAACAACGATGTCCGTTACCGTTTTGTCATTGACATTGCCTCTTCTTCTTCCCAACCCCCCTGCTCTTCCTAA 1095 0.5461 MDKTTPNHTQTVSGWAAHDSSGKITPFTFQRRENGANDVTIQILYCGICHTDLHYAKNDWGITMYPVVPGHEIVGVITKVGSNVKGFKEGDRAGVGCLAATCLDCEYCNTHQENYCQQLQFTYNGLFWDGTITYGGYSHMIVADYRYVVHIPEKLNMEGAAPLLCAGITVFSPMKDHGLVESGGKRIGVVGLGGLGHMAVKFGKAFGHHVTVISRSADKEWEAKHRLGADEFIVSSEQKQMEGGKKTMDFILDTVSGQHSLLPLLELLKINGTLFIVGAPSQPLELPAFPLIFGKRSVKGGIIGGIKETQEMLYLCGKHNITCDTELIRPDQINDAMHRLANNDVRYRFVIDIASSSSQPPCSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00067 364 Gene3D - 166 323 - -
Accr3g00067 364 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Accr3g00067 364 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Accr3g00067 364 Gene3D - 15 353 - -
Accr3g00067 364 CDD CAD1 14 352 IPR047109 GO:0016616
Accr3g00067 364 FunFam probable cinnamyl alcohol dehydrogenase 15 174 - -
Accr3g00067 364 SUPERFAMILY GroES-like 17 183 IPR011032 -
Accr3g00067 364 Pfam Zinc-binding dehydrogenase 194 314 IPR013149 -
Accr3g00067 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Accr3g00067 364 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0016616
Accr3g00067 364 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Accr3g00067 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00067 Accr-Chr3 862242 863655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00067 14 356 Monolignol Biosynthesis Gene Families AT2G21730 59.593 1.35e-147 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00067 K00083 - gmx:100820588 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00067 3 862242 863655 Accr3g00067 3 862242 863655 ECH