Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g00061 ATGGGACTTGGTTTTTTCAAGGCGCTTTGCTGCAGCAACTCTCACCATGAAATTCCCATAGTCTCATCGGACTCATCTCCGAGCCGCACTCGCAGGGAGAGGAGTAGAGAAGAGCACGCAGATAGAGCAAAGGCGGCTGCTCCGACGCAGGCACAAGTAGGGCCGGTGCTGGGGAAACCGTACGTGGACATAAGGAAGATGTACGAGCTGGAGAAAGAACTGGGGAGAGGGCAGTCGGGAGTGACATATCTGTGCACAGAGAAGATGACGGGGAGAAAGTACGCGTGCAAGAGCATACCGAGGAGGAAGCTGATGAGGAAGGAGGAAATAGAGGACGCGCGAAGGGAGATACTGTTGCTGCAGCATCTGTCGGGACAGCCCAACATAGTGGAATTCAGGGGGGGCTACGAGGACAGGCAGAATGTGTACCTGGTCATGGAACTCTGCACTGGAGGCGAGCTCTTCGACCGCATCATTGCCAAAGGCACGTATTCCGAGAAGGAGGCCGCCGCCTTGTTCCGCCAGATCGTCACCGTGGTTCACGTCTGCCACTTCATGGGAGTGATGCATCGGGACTTGAAGCCCGAGAATTTCTTGATGGCCAGCCCCGACGATGACGCCCCCATCAAAGCCACCGATTTCGGACTCTCCGTCTTCATTGAGCCCGGTAAAGAGTACAAGGAAATTGTGGGGAGTGCGTACTATGTGGCGCCAGAGGTTCTAAAACGGAGTTATGGAAAGGAGATAGATGTGTGGAGTGCAGGAATCATTTTATACATCCTCCTCAGTGGGGTGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATGCCATTCAGGAAGGCAGACTTGATCTCGAAAGTCAACCATGGCCTTCTATTTCAGCTTCTGCCAAGGATTTGATCAGGAAAATGTTGGCATATGATCCCAAGAAACGCATCACAGCTGCTGATGCCCTTGAACATCCATGGATGAAGGTGGGCGGTCAAGCATCTGACAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAAATGAAGAAACTTGCCCTGAAGGTAATAGCAGAAAACCTCTCGGAGGAAGAAATCAAGGGCTTGAAACAAATGTTCAACAATATGGATACAGATAACAGTGGCACGATCACACTTGAAGAACTCAAAGTTGGATTGACCAAATTGGGTTCCAAACTTAACGAATCTGAAATACGGCAGTTGATAGATGCTGCTGATGTTGACAAGAATGGAACTATTGATTACTATGAATTCATAACTGCCACCATGCATCGGCATAGACTTGAGAGGGAAGAGAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGTGGATTCATCACAAGAGAGGAGCTTAGGCAGGCTTTGGCTGAATACGGAATGGGGGATGAAGGCACCATAGATGAAGTGCTTGACGATGTGGACACTGATAAGGATGGCAGAATAAATTACGAAGAGTTTGTGGCTATGATGAAGAACGGGGATAAGATGAGGGTGAGAGAATGA 1548 0.4903 MGLGFFKALCCSNSHHEIPIVSSDSSPSRTRRERSREEHADRAKAAAPTQAQVGPVLGKPYVDIRKMYELEKELGRGQSGVTYLCTEKMTGRKYACKSIPRRKLMRKEEIEDARREILLLQHLSGQPNIVEFRGGYEDRQNVYLVMELCTGGELFDRIIAKGTYSEKEAAALFRQIVTVVHVCHFMGVMHRDLKPENFLMASPDDDAPIKATDFGLSVFIEPGKEYKEIVGSAYYVAPEVLKRSYGKEIDVWSAGIILYILLSGVPPFWAENEKGIFDAIQEGRLDLESQPWPSISASAKDLIRKMLAYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDNSGTITLEELKVGLTKLGSKLNESEIRQLIDAADVDKNGTIDYYEFITATMHRHRLEREENLFKAFQYFDKDNSGFITREELRQALAEYGMGDEGTIDEVLDDVDTDKDGRINYEEFVAMMKNGDKMRVRE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g00061 515 ProSiteProfiles Protein kinase domain profile. 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00061 515 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Accr3g00061 515 FunFam Calcium-dependent protein kinase 1 334 509 - -
Accr3g00061 515 Gene3D Transferase(Phosphotransferase) domain 1 154 332 - -
Accr3g00061 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Accr3g00061 515 SUPERFAMILY EF-hand 365 506 IPR011992 -
Accr3g00061 515 Gene3D Phosphorylase Kinase; domain 1 70 153 - -
Accr3g00061 515 FunFam Calcium-dependent protein kinase 1 70 153 - -
Accr3g00061 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 501 - -
Accr3g00061 515 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Accr3g00061 515 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Accr3g00061 515 MobiDBLite consensus disorder prediction 20 50 - -
Accr3g00061 515 SMART efh_1 445 473 IPR002048 GO:0005509
Accr3g00061 515 SMART efh_1 373 401 IPR002048 GO:0005509
Accr3g00061 515 SMART efh_1 409 437 IPR002048 GO:0005509
Accr3g00061 515 SMART efh_1 480 508 IPR002048 GO:0005509
Accr3g00061 515 MobiDBLite consensus disorder prediction 27 44 - -
Accr3g00061 515 Pfam Protein kinase domain 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00061 515 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Accr3g00061 515 ProSiteProfiles EF-hand calcium-binding domain profile. 481 511 IPR002048 GO:0005509
Accr3g00061 515 FunFam calcium-dependent protein kinase 1 154 333 - -
Accr3g00061 515 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Accr3g00061 515 Gene3D - 333 511 - -
Accr3g00061 515 SUPERFAMILY Protein kinase-like (PK-like) 67 327 IPR011009 -
Accr3g00061 515 Pfam EF-hand domain pair 443 506 IPR002048 GO:0005509
Accr3g00061 515 Pfam EF-hand domain pair 374 434 IPR002048 GO:0005509
Accr3g00061 515 SMART serkin_6 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g00061 515 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Accr3g00061 515 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Accr3g00061 515 CDD STKc_CAMK 68 325 - -
Accr3g00061 515 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g00061 Accr-Chr3 786750 791641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g00061 49 509 EF-hand Containing Proteins AT3G20410 72.668 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr3g00061 Pkinase 3.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g00061 K13412 - qsa:O6P43_018724 770.385